SitesBLAST
Comparing WP_024981841.1 NCBI__GCF_002017945.1:WP_024981841.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2nwwA Crystal structure of gltph in complex with tboa (see paper)
30% identity, 95% coverage: 18:415/417 of query aligns to 6:407/407 of 2nwwA
6x15A Inward-facing state of the glutamate transporter homologue gltph in complex with l-aspartate and sodium ions (see paper)
30% identity, 95% coverage: 18:415/417 of query aligns to 15:416/419 of 6x15A
- binding [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate: F46 (≠ L52), F46 (≠ L52), P75 (≠ D81), L91 (≠ T98), F95 (≠ I102), L130 (≠ F142), I133 (≠ F145), I159 (= I171), Y167 (≠ S179), K196 (= K200), G200 (≠ F204), I207 (≠ V211), F210 (= F214), L250 (= L251), I262 (≠ L267), M269 (≠ L274), T334 (≠ D339), V335 (≠ L340), G336 (≠ P341), T340 (= T345), L343 (= L348), M399 (≠ A398)
- binding aspartic acid: S277 (= S282), S278 (= S283), T314 (≠ S319), G354 (= G359), A358 (= A363), G359 (≠ S364), D394 (= D393), R397 (= R396), T398 (≠ S397)
- binding sodium ion: Y89 (≠ F96), T92 (≠ A99), S93 (= S100), G306 (= G311), T308 (≠ S313), N310 (= N315), N310 (= N315), M311 (≠ L316), D312 (= D317), S349 (= S354), I350 (≠ K355), T352 (≠ I357), N401 (= N400), V402 (= V401), D405 (≠ N404)
Sites not aligning to the query:
6x14A Inward-facing state of the glutamate transporter homologue gltph in complex with tfb-tboa (see paper)
30% identity, 95% coverage: 18:415/417 of query aligns to 12:413/413 of 6x14A
- binding [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate: G66 (= G75), V83 (≠ L93), I157 (≠ F172), Y164 (≠ S179), K193 (= K200), T305 (≠ S313), I306 (≠ F314), I347 (≠ K355)
- binding (2~{S},3~{S})-2-azanyl-3-[[3-[[4-(trifluoromethyl)phenyl]carbonylamino]phenyl]methoxy]butanedioic acid: I13 (= I19), M199 (= M206), S275 (= S283), T311 (≠ S319), G356 (≠ S364), L384 (= L386), D391 (= D393), R394 (= R396)
Sites not aligning to the query:
O59010 Glutamate transporter homolog; Glt(Ph); Sodium-aspartate symporter Glt(Ph); Sodium-dependent aspartate transporter from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 3 papers)
29% identity, 96% coverage: 18:417/417 of query aligns to 15:418/425 of O59010
- S65 (≠ T71) mutation to V: Strongly decreased chloride conductance.
- R276 (≠ T281) mutation to S: Increased rate of aspartate transport; when associated with R-395.
- RSS 276:278 (≠ TSS 281:283) binding L-aspartate
- M311 (≠ L316) mutation to A: Decreased dependence of aspartate binding on Na(+) concentration.
- T314 (≠ S319) binding L-aspartate
- V355 (= V360) binding L-aspartate
- D394 (= D393) binding L-aspartate
- M395 (= M394) mutation to R: Increased rate of aspartate transport; when associated with S-276.
- R397 (= R396) mutation to A: Strongly decreased affinity for aspartate.
- N401 (= N400) binding L-aspartate
- D405 (≠ N404) mutation to N: Strongly decreased affinity for aspartate.
6bavA Crystal structure of gltph r397c in complex with s-benzyl-l-cysteine (see paper)
29% identity, 95% coverage: 18:415/417 of query aligns to 7:408/409 of 6bavA
6bauA Crystal structure of gltph r397c in complex with l-cysteine (see paper)
29% identity, 95% coverage: 18:415/417 of query aligns to 7:408/408 of 6bauA
- binding cysteine: S270 (= S283), M303 (≠ L316), T306 (≠ S319), A345 (= A358), G346 (= G359), V347 (= V360), G351 (≠ S364), D386 (= D393), C389 (≠ R396), T390 (≠ S397), N393 (= N400)
7awmA Structure of the thermostabilized eaat1 cryst mutant in complex with l-asp, three sodium ions and the allosteric inhibitor ucph101 (see paper)
30% identity, 93% coverage: 26:411/417 of query aligns to 33:398/412 of 7awmA
- binding 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile: S88 (≠ V85), G89 (= G86), G92 (= G89), A95 (= A92), V96 (≠ L93), Y99 (≠ F96), M163 (≠ I171), F167 (≠ L175), F293 (= F306), V297 (≠ L310)
- binding aspartic acid: S268 (= S282), S269 (= S283), T306 (≠ S319), G346 (= G359), I347 (≠ V360), A350 (= A363), G351 (≠ S364), D380 (= D393), R383 (= R396), T384 (≠ S397)
7xr4A Structure of human excitatory amino acid transporter 2 (eaat2) in complex with glutamate (see paper)
28% identity, 94% coverage: 22:411/417 of query aligns to 17:411/425 of 7xr4A
7xr6A Structure of human excitatory amino acid transporter 2 (eaat2) in complex with way-213613 (see paper)
27% identity, 94% coverage: 22:411/417 of query aligns to 18:410/424 of 7xr6A
- binding (2S)-2-azanyl-4-[[4-[2-bromanyl-4,5-bis(fluoranyl)phenoxy]phenyl]amino]-4-oxidanylidene-butanoic acid: S280 (= S282), S281 (= S283), T318 (≠ S319), G363 (≠ S364), M367 (≠ V368), V385 (≠ L386), D388 (= D389), R395 (= R396), T396 (≠ S397)
- binding dodecyl beta-D-glucopyranoside: V19 (≠ M23), I20 (= I24), W389 (≠ H390)
- binding cholesterol hemisuccinate: R80 (= R87), R84 (≠ K91), I95 (= I102), I252 (≠ G255)
Sites not aligning to the query:
5mjuA Structure of the thermostabilized eaat1 cryst mutant in complex with the competititve inhibitor tfb-tboa and the allosteric inhibitor ucph101 (see paper)
29% identity, 93% coverage: 26:411/417 of query aligns to 25:384/397 of 5mjuA
- binding 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile: L72 (≠ I76), S80 (≠ V85), G81 (= G86), G84 (= G89), Y91 (≠ F96), M156 (≠ I171), F160 (≠ L175), F286 (= F306), V290 (≠ L310)
- binding (2~{S},3~{S})-2-azanyl-3-[[3-[[4-(trifluoromethyl)phenyl]carbonylamino]phenyl]methoxy]butanedioic acid: I64 (≠ V68), I148 (= I163), S262 (= S283), S263 (≠ E284), A292 (≠ Y312), T293 (≠ S313), M296 (≠ L316), T299 (≠ S319), G329 (= G356), A336 (= A363), G337 (≠ S364), D366 (= D393), R369 (= R396), N373 (= N400)
6xwnB Structure of glutamate transporter homologue glttk in the presence of tboa inhibitor (see paper)
29% identity, 96% coverage: 18:417/417 of query aligns to 13:418/426 of 6xwnB