Comparing WP_025272238.1 NCBI__GCF_000527155.1:WP_025272238.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
32% identity, 45% coverage: 302:551/555 of query aligns to 3:253/253 of 1g9xB
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
33% identity, 44% coverage: 311:552/555 of query aligns to 12:254/254 of 1g6hA
3c4jA Abc protein artp in complex with atp-gamma-s
28% identity, 44% coverage: 302:544/555 of query aligns to 2:230/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
28% identity, 44% coverage: 302:544/555 of query aligns to 2:230/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
28% identity, 44% coverage: 302:544/555 of query aligns to 2:230/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
28% identity, 44% coverage: 302:544/555 of query aligns to 2:230/242 of 2oljA
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
29% identity, 45% coverage: 302:552/555 of query aligns to 1:236/240 of 6mjpA
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
30% identity, 43% coverage: 303:542/555 of query aligns to 2:226/241 of 4u00A
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
30% identity, 44% coverage: 303:547/555 of query aligns to 1:234/240 of 4ymuJ
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
29% identity, 45% coverage: 303:553/555 of query aligns to 6:240/240 of 1ji0A
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
29% identity, 44% coverage: 308:552/555 of query aligns to 7:236/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
29% identity, 44% coverage: 308:552/555 of query aligns to 7:236/238 of 6s8gA
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
29% identity, 44% coverage: 308:551/555 of query aligns to 7:235/235 of 6mhzA
6mbnA Lptb e163q in complex with atp (see paper)
28% identity, 45% coverage: 301:552/555 of query aligns to 1:237/241 of 6mbnA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
29% identity, 44% coverage: 308:550/555 of query aligns to 7:234/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
29% identity, 44% coverage: 308:550/555 of query aligns to 7:234/234 of 4p31A
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
29% identity, 44% coverage: 308:549/555 of query aligns to 7:233/233 of 6b8bA
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
33% identity, 42% coverage: 303:534/555 of query aligns to 1:223/343 of P30750
Sites not aligning to the query:
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
30% identity, 45% coverage: 301:551/555 of query aligns to 2:239/501 of P04983
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
32% identity, 42% coverage: 303:534/555 of query aligns to 2:224/344 of 6cvlD
>WP_025272238.1 NCBI__GCF_000527155.1:WP_025272238.1
MFAGYESLLITIALAGILAYSFYAVLLAGQLSLGQAGFASLGAYVSTLVVPETPLFGSLS
PVLVGIPVGMAVGAFAAFLLGLPVLRLRGVFLAISTIAFSEVVRIFILNAEWTGGARGLR
LDKWVTVDLAWIVLALIAYCFWRFGPSRTGRAFAAVREDEIAAQSMGINVARTRMISFVT
SGAIAGLYGVMFAYFTRFIEPSNFDFSLMLDGLISAIVGGIALFIGPILAAAFFTPLPDI
MSGMGVEAGWIPSFVAAAILLLVILFLPGGLSSLLTKLKPNRPVSVSAEPPELAPLPQAG
SSLIELTGMSKHYGGVKAIDGVDLHLAAGEVLGIVGPNGAGKTTLINLVSGHVAPTSGQG
SVLNTPLKAKTAVHSVAKAGLSRTFQHSKLFDRLSVLNNVLVGTHSLARSTFLRRLVWIP
SARRDEAALKALAYRQLERVGLGDKAHLPAAQLSYGDQRRLEIARALASHPSVLILDEPA
AGMNPSEATELAELIESIKNEGVAVILIEHRMSMVADLSDRIMVLDFGKVIADDEPDAVL
NNEQVVEAYMGSADE
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Lawrence Berkeley National Laboratory