Comparing WP_027179906.1 NCBI__GCF_000429985.1:WP_027179906.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
5odqB Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with bromoethanesulfonate. (see paper)
26% identity, 51% coverage: 186:405/430 of query aligns to 1:238/291 of 5odqB
5odhH Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with heterodisulfide for 3.5 minutes (see paper)
26% identity, 51% coverage: 186:405/430 of query aligns to 1:238/291 of 5odhH
Sites not aligning to the query:
5odhB Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with heterodisulfide for 3.5 minutes (see paper)
26% identity, 51% coverage: 186:405/430 of query aligns to 1:238/291 of 5odhB
5odcB Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus at 2.3 a resolution (see paper)
26% identity, 51% coverage: 186:405/430 of query aligns to 1:238/291 of 5odcB
7bkbB Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) (see paper)
25% identity, 51% coverage: 187:405/430 of query aligns to 3:242/296 of 7bkbB
>WP_027179906.1 NCBI__GCF_000429985.1:WP_027179906.1
MSDLNRLASMLMELDDQMAACMKCGMCQAVCPVFAESMKESDVTRGKIALLEKLAHEMVK
DVDEVNEKLNRCLLCGTCAANCPSGVKIMDIFMKARVIVTTYKGLSPVKKAIFKGLLDRP
KLFNLLTDMGAVFGSPFMRSADKTIGTKSCALLTPLIGKRHFMPLAKRPFRKDYPSLDTE
RGESGLKVAFFPGCVVDKMFPHVGHAVIKVLNHHGVGIYLPENQACCGIPTLASGDLDTF
LSLMRKNVEAFDGGYFDYIVTPCATCTSTIKETWPKMLDDANSDIKEKVQELADKAMDIN
QFLVDVVGVKALDHKAGGKVVTYHDPCHLQKSLGVAAQPRELLKANPDYEFKEMNEANRC
CGNGGSFNLYHYDLSKKIGERKRDNVRASGADVVATGCPACMMQLGDLLSQSGGGVDVRH
VLEIYAEMID
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory