Comparing WP_027721502.1 NCBI__GCF_000425265.1:WP_027721502.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2dr1A Crystal structure of the ph1308 protein from pyrococcus horikoshii ot3
33% identity, 98% coverage: 10:379/379 of query aligns to 18:376/381 of 2dr1A
2z9xA Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxyl-l-alanine (see paper)
28% identity, 83% coverage: 62:377/379 of query aligns to 61:370/392 of 2z9xA
2z9wA Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxal (see paper)
28% identity, 83% coverage: 62:377/379 of query aligns to 61:370/392 of 2z9wA
2z9vA Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxamine (see paper)
28% identity, 83% coverage: 62:377/379 of query aligns to 61:370/392 of 2z9vA
Q988B8 Pyridoxamine--pyruvate transaminase; Pyridoxamine-pyruvate aminotransferase; EC 2.6.1.30 from Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) (Mesorhizobium loti (strain MAFF 303099)) (see 2 papers)
28% identity, 83% coverage: 62:377/379 of query aligns to 62:371/393 of Q988B8
Sites not aligning to the query:
1m32A Crystal structure of 2-aminoethylphosphonate transaminase (see paper)
26% identity, 95% coverage: 11:371/379 of query aligns to 3:354/361 of 1m32A
1m32B Crystal structure of 2-aminoethylphosphonate transaminase (see paper)
26% identity, 95% coverage: 11:371/379 of query aligns to 4:355/362 of 1m32B
P96060 2-aminoethylphosphonate--pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; AEP transaminase; AEPT; EC 2.6.1.37 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
26% identity, 95% coverage: 11:371/379 of query aligns to 8:359/367 of P96060
Sites not aligning to the query:
1vjoA Crystal structure of alanine--glyoxylate aminotransferase (alr1004) from nostoc sp. At 1.70 a resolution (see paper)
27% identity, 78% coverage: 63:356/379 of query aligns to 72:356/377 of 1vjoA
6pd2C Pntc-aept: fusion protein of phosphonate-specific cytidylyltransferase and 2-aminoethylphosphonate (aep) transaminase from treponema denticola in complex with cytidine monophosphate-aep (see paper)
25% identity, 96% coverage: 15:376/379 of query aligns to 256:610/616 of 6pd2C
Sites not aligning to the query:
Q73MU2 Bifunctional 2-aminoethylphosphonate cytidylyltransferase/aminotransferase; EC 2.7.7.107; EC 2.6.1.37 from Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) (see paper)
25% identity, 96% coverage: 15:376/379 of query aligns to 256:610/616 of Q73MU2
Sites not aligning to the query:
3zrqA Crystal structure and substrate specificity of a thermophilic archaeal serine : pyruvate aminotransferase from sulfolobus solfataricus (see paper)
28% identity, 93% coverage: 8:361/379 of query aligns to 1:345/382 of 3zrqA
3zrrA Crystal structure and substrate specificity of a thermophilic archaeal serine : pyruvate aminotransferase from sulfolobus solfataricus (see paper)
28% identity, 93% coverage: 11:361/379 of query aligns to 1:342/379 of 3zrrA
3zrpA Crystal structure and substrate specificity of a thermophilic archaeal serine : pyruvate aminotransferase from sulfolobus solfataricus (see paper)
28% identity, 92% coverage: 14:361/379 of query aligns to 3:341/377 of 3zrpA
6pk3B Alanine-glyoxylate aminotransferase 1 (agt1) from arabidopsis thaliana (see paper)
25% identity, 92% coverage: 11:359/379 of query aligns to 11:353/400 of 6pk3B
Q56YA5 Serine--glyoxylate aminotransferase; Alanine--glyoxylate aminotransferase; AGT; Asparagine aminotransferase; Serine--pyruvate aminotransferase; EC 2.6.1.45; EC 2.6.1.44; EC 2.6.1.-; EC 2.6.1.51 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
25% identity, 92% coverage: 11:359/379 of query aligns to 12:354/401 of Q56YA5
6pk1A Alanine-glyoxylate aminotransferase 1 (agt1) from arabidopsis thaliana in presence of serine (see paper)
25% identity, 92% coverage: 11:359/379 of query aligns to 10:352/399 of 6pk1A
2huuA Crystal structure of aedes aegypti alanine glyoxylate aminotransferase in complex with alanine (see paper)
25% identity, 82% coverage: 65:375/379 of query aligns to 75:380/385 of 2huuA
Sites not aligning to the query:
2huiA Crystal structure of aedes aegypti alanine glyoxylate aminotransferase in complex with glyoxylic acid (see paper)
25% identity, 82% coverage: 65:375/379 of query aligns to 75:380/385 of 2huiA
Sites not aligning to the query:
2hufA Crystal structure of aedes aegypti alanine glyoxylate aminotransferase (see paper)
25% identity, 82% coverage: 65:375/379 of query aligns to 75:380/385 of 2hufA
Sites not aligning to the query:
>WP_027721502.1 NCBI__GCF_000425265.1:WP_027721502.1
MIGDDFVDLKLFITGPILLREEVRRAGLLPEFGHRDSENPKRFEPIMRNLLAIAGNPKGY
TPIIFNGSGTNVLEASIRSLVSDSDKVLNVSVGAFGDLYHTLAVVNGKNAVQLKFAHGKA
IDMQELEVALKEHKPDVVTFTHNETATGVINDVVQVCELIRANGALPIVDGVSIFGGAPS
MISEAKPLMYCTSTQKSLGLPAGFGIGFVSEEAMEKAATVENRGYTTDIIAQMGKAKINQ
TLTTPNGTLANQMCVQLDYIVNSETVAGRFKRHEDMRTIAHKWSEIMDGYELFAQEGFRS
PSLTTFKTPSYMTIDKLKEVKELMREHGYLFDPGYGKINKELADQGESPIFRVGHMADIM
PEMLTEYLEVLGEVLNTFN
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory