Comparing WP_027722882.1 NCBI__GCF_000425265.1:WP_027722882.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3ie7A The crystal structure of phosphofructokinase (lin2199) from listeria innocua in complex with atp at 1.6a
30% identity, 97% coverage: 7:311/316 of query aligns to 3:305/309 of 3ie7A
2jgvB Structure of staphylococcus aureus d-tagatose-6-phosphate kinase in complex with adp (see paper)
29% identity, 83% coverage: 7:268/316 of query aligns to 6:268/314 of 2jgvB
Sites not aligning to the query:
2jg1C Structure of staphylococcus aureus d-tagatose-6-phosphate kinase with cofactor and substrate (see paper)
29% identity, 83% coverage: 7:268/316 of query aligns to 7:269/315 of 2jg1C
Sites not aligning to the query:
2jg1A Structure of staphylococcus aureus d-tagatose-6-phosphate kinase with cofactor and substrate (see paper)
29% identity, 83% coverage: 7:268/316 of query aligns to 10:272/318 of 2jg1A
Sites not aligning to the query:
3julA Crystal structure of listeria innocua d-tagatose-6-phosphate kinase bound with substrate
30% identity, 97% coverage: 7:311/316 of query aligns to 3:294/298 of 3julA
2f02A Crystal structure of lacc from enterococcus faecalis in complex with atp
30% identity, 83% coverage: 7:269/316 of query aligns to 3:267/319 of 2f02A
Sites not aligning to the query:
3uqdB Crystal structure of the phosphofructokinase-2 from escherichia coli in complex with substrates and products (see paper)
32% identity, 91% coverage: 6:291/316 of query aligns to 3:290/309 of 3uqdB
3uqdA Crystal structure of the phosphofructokinase-2 from escherichia coli in complex with substrates and products (see paper)
32% identity, 91% coverage: 6:291/316 of query aligns to 3:290/309 of 3uqdA
3n1cA Crystal structure of the phosphofructokinase-2 from escherichia coli in complex with fructose-6-phosphate (see paper)
32% identity, 91% coverage: 6:291/316 of query aligns to 3:290/309 of 3n1cA
P06999 ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; 6-phosphofructokinase isozyme II; Phosphohexokinase 2; EC 2.7.1.11 from Escherichia coli (strain K12) (see 3 papers)
32% identity, 91% coverage: 6:291/316 of query aligns to 3:290/309 of P06999
Sites not aligning to the query:
3uqeA Crystal structure of the phosphofructokinase-2 mutant y23d from escherichia coli
31% identity, 93% coverage: 6:300/316 of query aligns to 3:299/307 of 3uqeA
3cqdA Structure of the tetrameric inhibited form of phosphofructokinase-2 from escherichia coli (see paper)
32% identity, 86% coverage: 6:276/316 of query aligns to 3:274/304 of 3cqdA
Sites not aligning to the query:
2ajrA Crystal structure of possible 1-phosphofructokinase (ec 2.7.1.56) (tm0828) from thermotoga maritima at 2.46 a resolution
27% identity, 98% coverage: 7:315/316 of query aligns to 3:320/320 of 2ajrA
P9WID3 ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; Phosphofructokinase B; Phosphohexokinase 2; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
28% identity, 95% coverage: 6:305/316 of query aligns to 13:315/339 of P9WID3
P0DX97 Deoxyribokinase; dRK; ATP:2-deoxy-D-ribose 5-phosphotransferase; EC 2.7.1.229 from Salmonella typhi (see paper)
34% identity, 28% coverage: 174:262/316 of query aligns to 165:256/306 of P0DX97
Sites not aligning to the query:
6ilsB Structure of arabidopsis thaliana ribokinase complexed with ribose and atp (see paper)
29% identity, 83% coverage: 37:298/316 of query aligns to 35:301/313 of 6ilsB
Sites not aligning to the query:
A1A6H3 Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
28% identity, 83% coverage: 37:298/316 of query aligns to 101:367/379 of A1A6H3
Sites not aligning to the query:
1tz3A Crystal structure of aminoimidazole riboside kinase complexed with aminoimidazole riboside (see paper)
33% identity, 38% coverage: 174:292/316 of query aligns to 162:274/299 of 1tz3A
Sites not aligning to the query:
1tz6A Crystal structure of aminoimidazole riboside kinase from salmonella enterica complexed with aminoimidazole riboside and atp analog (see paper)
33% identity, 38% coverage: 174:292/316 of query aligns to 162:274/297 of 1tz6A
Sites not aligning to the query:
Q8ZKR2 Aminoimidazole riboside kinase; AIRs kinase; EC 2.7.1.223 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
33% identity, 38% coverage: 174:292/316 of query aligns to 173:285/319 of Q8ZKR2
Sites not aligning to the query:
>WP_027722882.1 NCBI__GCF_000425265.1:WP_027722882.1
MSKFKHIITVTMNPAIDLACQVPDFTAGKVNRVAGYQTDAAGKGVNIAVLLRKFDLPVTV
TGFLGADNALIFEKLFSSKGLKDEFVRVPGETRIGVKVLDPDSGATTDINFPGLSPDAGH
VDKLMQTVDNLADESSIVVIGGSLPATVSPAAVGQLVNVIKSCGAKAVVDTSGPALSSAI
VAVPCLVKPNDAELSELVGRPLKKKEELVNEARRMNRSGIDTVVVSLGSQGALFISQEEE
FFAKPPTINAVSTVGAGDAMIGGMVAGMALELSLRERACLATSLSAATVAQAGPSLEDIE
IAKELEEQVVIETISF
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory