SitesBLAST
Comparing WP_027958133.1 NCBI__GCF_000336575.1:WP_027958133.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7qh2C Cryo-em structure of ldh-etfab complex from acetobacterium woodii (see paper)
30% identity, 86% coverage: 44:470/499 of query aligns to 33:462/467 of 7qh2C
- binding flavin-adenine dinucleotide: V73 (≠ T84), G75 (= G86), S76 (≠ A87), G77 (= G88), T78 (= T89), G79 (= G90), L80 (= L91), A83 (≠ G94), C84 (≠ A95), P137 (= P148), G138 (≠ S149), E139 (≠ S150), A142 (= A153), T143 (≠ S155), G146 (= G158), N147 (= N159), S149 (≠ A161), T150 (≠ E162), A152 (= A164), G153 (= G165), E203 (= E214), G204 (= G215), I209 (≠ V220), E422 (= E430), H423 (= H431)
- binding fe (iii) ion: H377 (= H386), H384 (= H393), E422 (= E430)
P9WIT1 Uncharacterized FAD-linked oxidoreductase Rv2280; EC 1.-.-.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
36% identity, 83% coverage: 56:469/499 of query aligns to 40:453/459 of P9WIT1
- K354 (≠ R365) modified: Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-Cter in protein Pup)
8jdeA Crystal structure of mldhd in complex with d-lactate (see paper)
29% identity, 83% coverage: 56:470/499 of query aligns to 40:453/455 of 8jdeA
- binding flavin-adenine dinucleotide: P68 (≠ T84), G70 (= G86), T71 (≠ A87), G72 (= G88), T73 (= T89), G74 (= G90), G78 (= G94), V79 (≠ A95), L90 (≠ M106), P132 (= P148), G133 (≠ S149), A134 (≠ S150), G140 (= G158), M141 (≠ N159), A143 (= A161), T144 (≠ E162), A146 (= A164), S147 (≠ G165), E200 (= E214), G201 (= G215), I206 (≠ V220), W322 (≠ F341), E413 (= E430), H414 (= H431), N450 (= N467)
- binding lactic acid: R318 (= R337), H369 (= H386), H376 (= H393), H414 (= H431)
- binding manganese (ii) ion: H369 (= H386), H376 (= H393), E413 (= E430)
8jdsA Crystal structure of mldhd in complex with pyruvate (see paper)
29% identity, 83% coverage: 56:470/499 of query aligns to 40:454/456 of 8jdsA
- binding flavin-adenine dinucleotide: P68 (≠ T84), G70 (= G86), T71 (≠ A87), G72 (= G88), T73 (= T89), G74 (= G90), G78 (= G94), V79 (≠ A95), L90 (≠ M106), P132 (= P148), G133 (≠ S149), A134 (≠ S150), G140 (= G158), M141 (≠ N159), A143 (= A161), T144 (≠ E162), A146 (= A164), S147 (≠ G165), E200 (= E214), G201 (= G215), I206 (≠ V220), W323 (≠ F341), E414 (= E430), H415 (= H431), N451 (= N467)
- binding manganese (ii) ion: H370 (= H386), H377 (= H393), E414 (= E430)
- binding pyruvic acid: R319 (= R337), H370 (= H386), H377 (= H393), H415 (= H431)
Sites not aligning to the query:
8jdtA Crystal structure of mldhd in complex with 2-ketobutanoic acid (see paper)
29% identity, 83% coverage: 56:470/499 of query aligns to 40:453/455 of 8jdtA
- binding 2-ketobutyric acid: R318 (= R337), H369 (= H386), H376 (= H393), H414 (= H431)
- binding flavin-adenine dinucleotide: P68 (≠ T84), G70 (= G86), T71 (≠ A87), G72 (= G88), T73 (= T89), G74 (= G90), G78 (= G94), V79 (≠ A95), L90 (≠ M106), P132 (= P148), G133 (≠ S149), A134 (≠ S150), G140 (= G158), M141 (≠ N159), A143 (= A161), T144 (≠ E162), A146 (= A164), S147 (≠ G165), E200 (= E214), G201 (= G215), I206 (≠ V220), W322 (≠ F341), E413 (= E430), H414 (= H431), N450 (= N467)
- binding manganese (ii) ion: H369 (= H386), H376 (= H393), E413 (= E430)
8jdzA Crystal structure of mldhd in complex with 2-keto-3-methylvaleric acid (see paper)
29% identity, 83% coverage: 56:470/499 of query aligns to 40:452/454 of 8jdzA
- binding (3S)-3-methyl-2-oxopentanoic acid: R318 (= R337), W322 (≠ F341), H369 (= H386), H376 (= H393), H413 (= H431)
- binding flavin-adenine dinucleotide: P68 (≠ T84), G70 (= G86), T71 (≠ A87), G72 (= G88), T73 (= T89), G74 (= G90), G78 (= G94), V79 (≠ A95), L90 (≠ M106), P132 (= P148), G133 (≠ S149), A134 (≠ S150), G140 (= G158), M141 (≠ N159), A143 (= A161), T144 (≠ E162), A146 (= A164), S147 (≠ G165), E200 (= E214), G201 (= G215), I206 (≠ V220), W322 (≠ F341), E412 (= E430), H413 (= H431), N449 (= N467)
- binding manganese (ii) ion: H369 (= H386), H376 (= H393), E412 (= E430)
Sites not aligning to the query:
8jdyA Crystal structure of mldhd in complex with 2-ketoisocaproic acid (see paper)
29% identity, 83% coverage: 56:470/499 of query aligns to 40:452/454 of 8jdyA
- binding 2-oxo-4-methylpentanoic acid: R318 (= R337), W322 (≠ F341), S336 (≠ C353), H369 (= H386), H376 (= H393), H413 (= H431)
- binding flavin-adenine dinucleotide: P68 (≠ T84), G70 (= G86), T71 (≠ A87), G72 (= G88), T73 (= T89), G74 (= G90), G78 (= G94), V79 (≠ A95), L90 (≠ M106), P132 (= P148), G133 (≠ S149), A134 (≠ S150), G140 (= G158), M141 (≠ N159), A143 (= A161), T144 (≠ E162), A146 (= A164), S147 (≠ G165), E200 (= E214), G201 (= G215), I206 (≠ V220), E412 (= E430), N449 (= N467)
- binding manganese (ii) ion: H369 (= H386), H376 (= H393), E412 (= E430)
8jdvA Crystal structure of mldhd in complex with 2-ketohexanoic acid (see paper)
29% identity, 83% coverage: 56:470/499 of query aligns to 40:452/454 of 8jdvA
- binding 2-Ketohexanoic acid: V75 (≠ L91), R317 (= R337), W321 (≠ F341), H368 (= H386), H375 (= H393), H413 (= H431)
- binding flavin-adenine dinucleotide: P68 (≠ T84), G70 (= G86), T71 (≠ A87), G72 (= G88), T73 (= T89), G74 (= G90), G78 (= G94), V79 (≠ A95), L90 (≠ M106), P132 (= P148), G133 (≠ S149), A134 (≠ S150), G140 (= G158), M141 (≠ N159), A143 (= A161), T144 (≠ E162), A146 (= A164), S147 (≠ G165), E200 (= E214), G201 (= G215), I206 (≠ V220), W321 (≠ F341), Y322 (≠ P342), E412 (= E430), H413 (= H431), N449 (= N467)
- binding manganese (ii) ion: H368 (= H386), H375 (= H393), E412 (= E430)
8jdpA Crystal structure of h405a mldhd in complex with d-2-hydroxyisovaleric acid (see paper)
29% identity, 83% coverage: 56:470/499 of query aligns to 40:453/455 of 8jdpA
- binding flavin-adenine dinucleotide: P68 (≠ T84), G70 (= G86), T71 (≠ A87), G72 (= G88), T73 (= T89), G74 (= G90), G78 (= G94), V79 (≠ A95), L90 (≠ M106), P132 (= P148), G133 (≠ S149), A134 (≠ S150), G140 (= G158), M141 (≠ N159), A143 (= A161), T144 (≠ E162), A146 (= A164), S147 (≠ G165), E200 (= E214), G201 (= G215), I206 (≠ V220), H369 (= H386), E413 (= E430), N450 (= N467)
- binding deaminohydroxyvaline: R319 (= R337), H414 (= H431)
8jduA Crystal structure of mldhd in complex with 2-ketovaleric acid (see paper)
29% identity, 83% coverage: 56:470/499 of query aligns to 40:453/455 of 8jduA