SitesBLAST
Comparing WP_028312219.1 NCBI__GCF_000482785.1:WP_028312219.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
8gy3C Cryo-em structure of membrane-bound aldehyde dehydrogenase from gluconobacter oxydans
28% identity, 91% coverage: 71:795/801 of query aligns to 8:718/732 of 8gy3C
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): M38 (≠ F101), G39 (= G102), Q40 (= Q103), H41 (≠ G104), V42 (= V105), A45 (= A108), G79 (= G146), G80 (= G147), S81 (= S148), S83 (= S150), V84 (≠ I151), G374 (= G471), F375 (= F472), L379 (≠ A476), L499 (≠ W594), R500 (= R595), V624 (= V700), D625 (≠ N701), Q632 (= Q708), T687 (= T764), G688 (= G765), L689 (≠ M766), G690 (= G767), E691 (= E768)
5y6qC Crystal structure of an aldehyde oxidase from methylobacillus sp. Ky4400 (see paper)
26% identity, 38% coverage: 406:709/801 of query aligns to 169:444/748 of 5y6qC
Sites not aligning to the query:
- active site: 715, 716
- binding pterin cytosine dinucleotide: 461, 462, 463, 464, 468, 500, 502, 503, 504, 505, 638, 640, 641, 648, 711, 713, 714, 715
1t3qB Crystal structure of quinoline 2-oxidoreductase from pseudomonas putida 86 (see paper)
23% identity, 52% coverage: 215:627/801 of query aligns to 5:403/786 of 1t3qB
Sites not aligning to the query:
- active site: 743, 744
- binding pterin cytosine dinucleotide: 506, 507, 508, 510, 513, 545, 547, 549, 550, 666, 670, 674, 675, 678, 739, 740, 741, 742
1rm6A Structure of 4-hydroxybenzoyl-coa reductase from thauera aromatica (see paper)
35% identity, 15% coverage: 673:795/801 of query aligns to 617:745/761 of 1rm6A
- active site: E718 (vs. gap), G719 (vs. gap)
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): L646 (≠ V700), N647 (= N701), V651 (= V705), Q654 (= Q708), K714 (≠ G767), E715 (= E768), A716 (≠ P769), S717 (≠ G770), E718 (vs. gap)
Sites not aligning to the query:
- active site: 206, 241, 318, 322, 350
- binding (molybdopterin-cytosine dinucleotide-s,s)-dioxo-aqua-molybdenum(v): 235, 236, 237, 238, 350, 473, 474, 475, 476, 513, 514, 515, 517, 518
O33819 4-hydroxybenzoyl-CoA reductase subunit alpha; 4-HBCR subunit alpha; EC 1.1.7.1 from Thauera aromatica (see paper)
35% identity, 15% coverage: 673:795/801 of query aligns to 625:753/769 of O33819
- VGKALN 650:655 (≠ CNFAVN 696:701) binding Mo-molybdopterin cytosine dinucleotide
- KEAS 722:725 (≠ GEPG 767:770) binding Mo-molybdopterin cytosine dinucleotide
Sites not aligning to the query:
- 214 binding Mo-molybdopterin cytosine dinucleotide
- 244:245 binding Mo-molybdopterin cytosine dinucleotide
- 522:526 binding Mo-molybdopterin cytosine dinucleotide
7dqxD Crystal structure of xanthine dehydrogenase family protein
26% identity, 28% coverage: 405:627/801 of query aligns to 181:395/770 of 7dqxD
Sites not aligning to the query:
- binding pterin cytosine dinucleotide: 491, 492, 493, 494, 498, 530, 531, 532, 533, 534, 535, 536, 658, 659, 662, 725, 726, 727, 728
4uhxA Human aldehyde oxidase in complex with phthalazine and thioridazine (see paper)
24% identity, 29% coverage: 395:625/801 of query aligns to 684:905/1290 of 4uhxA
Sites not aligning to the query:
- active site: 1223, 1224
- binding flavin-adenine dinucleotide: 43, 44, 229, 230, 231, 232, 233, 234, 235, 236, 237, 310, 311, 319, 320, 323, 324, 326, 329, 332, 333, 377, 404
- binding fe2/s2 (inorganic) cluster: 40, 41, 42, 44, 46, 47, 49, 69, 71, 111, 112, 114, 146, 148
- binding 10-{2-[(2S)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine: 540, 542, 543, 1014, 1015, 1018, 1019, 1020, 1079
- binding 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine: 540, 542, 543, 1014, 1015, 1018, 1019, 1020
Q06278 Aldehyde oxidase; Aldehyde oxidase 1; Azaheterocycle hydroxylase; EC 1.2.3.1; EC 1.17.3.- from Homo sapiens (Human) (see 3 papers)
26% identity, 29% coverage: 395:625/801 of query aligns to 728:951/1338 of Q06278
- R802 (≠ M467) to C: decreases homodimerization but nearly no effect on kinetic parameters; dbSNP:rs41309768
- AF 806:807 (≠ GF 471:472) binding Mo-molybdopterin
- R921 (= R595) to H: increases homodimerization; abolishes enzymatic activity on phenanthridine; decreases turnover number with benzaldehyde, phtalazine and chloroquinazolinone as substrate, while nearly no effect on the KM; dbSNP:rs56199635
Sites not aligning to the query:
- 44 binding [2Fe-2S] cluster; C→W: Disrupts protein stability.
- 49 binding [2Fe-2S] cluster
- 52 binding [2Fe-2S] cluster
- 74 binding [2Fe-2S] cluster
- 113 binding Mo-molybdopterin
- 114 binding [2Fe-2S] cluster
- 117 binding [2Fe-2S] cluster
- 149 binding [2Fe-2S] cluster
- 151 binding [2Fe-2S] cluster; binding Mo-molybdopterin
- 264:271 binding FAD
- 345 binding FAD
- 354 binding FAD
- 358 binding FAD
- 367 binding FAD
- 411 binding FAD
- 1047 binding Mo-molybdopterin
- 1088:1091 binding Mo-molybdopterin
- 1135 N → S: increases homodimerization and turnover number with phenanthridine as substrate; nearly no effect on kinetic parameters with benzaldehyde, phtalazine and chloroquinazolinone as substrate; dbSNP:rs55754655
- 1203 binding Mo-molybdopterin
- 1268 binding Mo-molybdopterin
- 1269 G→R: No effect on dimerization. Loss of oxidase activity.
- 1271 S → L: no effect on dimerization; no effect on oxidase activity; dbSNP:rs141786030
- 1297 H → R: increases homodimerization and turnover number with phenanthridine as substrate; nearly no effect on kinetic parameters with benzaldehyde, phtalazine and chloroquinazolinone as substrate; dbSNP:rs3731722
8emtB Cryo-em analysis of the human aldehyde oxidase from liver (see paper)
26% identity, 29% coverage: 395:625/801 of query aligns to 613:836/1221 of 8emtB
Sites not aligning to the query:
- binding flavin-adenine dinucleotide: 210, 211, 213, 214, 216, 217, 218, 291, 292, 300, 304, 305, 307, 314
- binding fe2/s2 (inorganic) cluster: 38, 39, 40, 42, 44, 45, 47, 69, 109, 112, 144, 146
8emtA Cryo-em analysis of the human aldehyde oxidase from liver (see paper)
26% identity, 29% coverage: 395:625/801 of query aligns to 646:869/1254 of 8emtA
Sites not aligning to the query:
- binding flavin-adenine dinucleotide: 215, 216, 217, 218, 219, 221, 222, 223, 296, 297, 306, 309, 310, 312, 319
- binding fe2/s2 (inorganic) cluster: 40, 41, 42, 44, 45, 46, 49, 69, 71, 111, 112, 114, 146, 148
7orcB Human aldehyde oxidase in complex with raloxifene (see paper)
26% identity, 29% coverage: 395:625/801 of query aligns to 691:914/1299 of 7orcB
Sites not aligning to the query:
- binding flavin-adenine dinucleotide: 43, 44, 228, 229, 230, 231, 232, 233, 234, 235, 236, 309, 310, 318, 319, 322, 323, 326, 328, 331, 332, 376, 403
- binding fe2/s2 (inorganic) cluster: 40, 41, 42, 44, 46, 47, 49, 69, 71, 111, 112, 114, 146, 148
- binding raloxifene: 417, 418, 419, 449, 451, 506, 507, 616, 619
5g5gC Escherichia coli periplasmic aldehyde oxidase (see paper)
22% identity, 50% coverage: 223:625/801 of query aligns to 13:380/731 of 5g5gC
Sites not aligning to the query:
- active site: 692, 693
- binding pterin cytosine dinucleotide: 468, 469, 470, 507, 509, 511, 512, 617, 618, 621, 625, 688, 690, 691, 692
P77489 Aldehyde oxidoreductase molybdenum-binding subunit PaoC; EC 1.2.99.6 from Escherichia coli (strain K12) (see 2 papers)
22% identity, 50% coverage: 223:625/801 of query aligns to 13:380/732 of P77489
- GF 241:242 (= GF 471:472) binding Mo-molybdopterin cytosine dinucleotide
Sites not aligning to the query:
- 440 mutation R->H,K: Decrease in catalytic efficiency.
- 468:470 binding Mo-molybdopterin cytosine dinucleotide
- 511:512 binding Mo-molybdopterin cytosine dinucleotide
- 615:621 binding Mo-molybdopterin cytosine dinucleotide
- 625 binding Mo-molybdopterin cytosine dinucleotide
- 688:691 binding Mo-molybdopterin cytosine dinucleotide
- 692 E→Q: Loss of activity.
O54754 Aldehyde oxidase 1; Azaheterocycle hydroxylase 1; Retinal oxidase; EC 1.2.3.1; EC 1.17.3.- from Mus musculus (Mouse) (see paper)
24% identity, 40% coverage: 228:544/801 of query aligns to 579:871/1333 of O54754
- V806 (≠ A476) mutation to E: Decreases substrate affinity and activity on benzaldehyde, phthalazine and acetaldehyde, while increases affinity for more hydrophobic aldehydes like retinal. Abolishes catalytic activity; when associated with R-884.
Sites not aligning to the query:
- 884 M→R: Abolishes catalytic activity on phthalazine and acetaldehyde. Decreases catalytic efficiency on benzaldehyde and retinal. Abolishes catalytic activity; when associated with E-806.
- 1265 E→Q: Abolishes catalytic activity.
3hrdB Crystal structure of nicotinate dehydrogenase (see paper)
27% identity, 12% coverage: 700:795/801 of query aligns to 215:316/330 of 3hrdB
- active site: E289 (= E768), P290 (= P769)
- binding pterin cytosine dinucleotide: I215 (≠ V700), N216 (= N701), M219 (≠ T704), V220 (= V705), Q223 (= Q708), K285 (≠ T764), G286 (= G765), V287 (≠ M766), G288 (= G767), E289 (= E768)
Sites not aligning to the query:
Q0QLF1 Nicotinate dehydrogenase medium molybdopterin subunit; NDH; Nicotinic acid hydroxylase medium molybdopterin subunit; NAH; EC 1.17.1.5 from Eubacterium barkeri (Clostridium barkeri) (see paper)
27% identity, 12% coverage: 700:795/801 of query aligns to 215:316/330 of Q0QLF1
- AKGVGE 284:289 (≠ -TGMGE 764:768) binding Se-Mo-molybdopterin cytosine dinucleotide
Sites not aligning to the query:
- 45:49 binding Se-Mo-molybdopterin cytosine dinucleotide
- 85:90 binding Se-Mo-molybdopterin cytosine dinucleotide
- 211:223 binding Se-Mo-molybdopterin cytosine dinucleotide
Query Sequence
>WP_028312219.1 NCBI__GCF_000482785.1:WP_028312219.1
MRLDRFLSDPELRAAAQADSPLIDATEAAGEVRIDRRRFLLSTAAGSLMLGLAPLARAAS
EQTDKPQIWGAAPPPKALPPGPFISIGADDSVTVQVNRLDFGQGVQTALPMLIAEELDCD
WRKIKPELAPAGDAYKDPVFGIQMVGGSNSIKNSWLHYRTLGATARALLVNAAAQRWKLD
VASLRTADGAVIAPDGKRLRYGELAESAAGIALPETVMLKKPEQFRLLGKPTRRLDATAK
SSGRQSYGIDRQLPGLKVAVVAHPPVFGAKVASVDDAKAKAVKGVRAVLRIPADRGGEAI
AVVADGYWPAKQAREALDIKWDTSAVEKPDSAALLASYRERAKQKGTVAMAADMGPLTAP
LGAGDRAGAAAGGMTTVAGTARATTVTGAPSTAAVTEPLGATAKVIEAEYVFPYLAHAPM
EPLNCTIALKDGSAEVWCGSQFQTVDQNAIAKTLDLEPAKVKFNTEMAGGGFGRRAVPSS
DYVVEAARIARAWAADGHAEPVKMIWSREDDIRGGYYRPMHVHRARIAVDAGGRVLAWEH
RIVGQSIVKGTLFEGFLFKNGIDGTMVEGMGAPYAVPMELSVHNMDVNVPVLWWRSVGST
HTAYVMETLVDELAANAGADPVEYRRKLIGPNHPRHLAALDLAVQKSGYGKRRLPAGHAW
GVALHESFNSVVAYVVEASVADGKPKLHHVWGGVHCNFAVNPLTVQAQVEGAALMALGTT
LPGAAITLKDGAVEQTNFHQYTVARMPDMPVVEVFIVPSVDAPTGMGEPGLPALAPALAN
AVAKLTGKRLRSLPFEMQSAA
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory