Comparing WP_028313592.1 NCBI__GCF_000429905.1:WP_028313592.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1vrgA Crystal structure of propionyl-coa carboxylase, beta subunit (tm0716) from thermotoga maritima at 2.30 a resolution
41% identity, 99% coverage: 5:516/517 of query aligns to 3:514/515 of 1vrgA
7ybuP Human propionyl-coenzyme a carboxylase
38% identity, 98% coverage: 11:516/517 of query aligns to 6:506/507 of 7ybuP
1on3C Transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) (see paper)
39% identity, 100% coverage: 1:516/517 of query aligns to 1:509/510 of 1on3C
1on3E Transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) (see paper)
39% identity, 100% coverage: 1:516/517 of query aligns to 5:519/520 of 1on3E
Q168G2 Propionyl-CoA carboxylase beta chain; EC 6.4.1.3 from Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) (see paper)
37% identity, 99% coverage: 5:516/517 of query aligns to 1:509/510 of Q168G2
3n6rB Crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) (see paper)
38% identity, 96% coverage: 21:516/517 of query aligns to 13:505/506 of 3n6rB
8pn7A Engineered glycolyl-coa carboxylase (g20r variant) with bound coa (see paper)
38% identity, 98% coverage: 9:516/517 of query aligns to 1:505/506 of 8pn7A
3ib9A Propionyl-coa carboxylase beta subunit, d422l (see paper)
36% identity, 98% coverage: 11:516/517 of query aligns to 8:520/521 of 3ib9A
1xnyA Biotin and propionyl-coa bound to acyl-coa carboxylase beta subunit from s. Coelicolor (pccb) (see paper)
36% identity, 98% coverage: 11:516/517 of query aligns to 8:520/521 of 1xnyA
5iniF Structural basis for acyl-coa carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics (see paper)
35% identity, 98% coverage: 9:516/517 of query aligns to 6:510/511 of 5iniF
8sgxE Leishmania tarentolae propionyl-coa carboxylase (alpha-4-beta-6) (see paper)
36% identity, 94% coverage: 29:516/517 of query aligns to 6:488/489 of 8sgxE
3u9sF Crystal structure of p. Aeruginosa 3-methylcrotonyl-coa carboxylase (mcc) 750 kd holoenzyme, coa complex (see paper)
32% identity, 77% coverage: 5:401/517 of query aligns to 24:415/537 of 3u9sF
Sites not aligning to the query:
8rthF Trypanosoma brucei 3-methylcrotonyl-coa carboxylase (see paper)
29% identity, 90% coverage: 29:495/517 of query aligns to 67:535/542 of 8rthF
8k2vG 3-methylcrotonyl-coa carboxylase in mccd state with acetyl coa
31% identity, 84% coverage: 3:438/517 of query aligns to 25:454/541 of 8k2vG
8j4zJ Human 3-methylcrotonyl-coa carboxylase in bccp-cts state with substrate
31% identity, 84% coverage: 3:438/517 of query aligns to 25:454/541 of 8j4zJ
Sites not aligning to the query:
8f3dA 3-methylcrotonyl-coa carboxylase in filament, beta-subunit centered (see paper)
29% identity, 78% coverage: 33:434/517 of query aligns to 84:491/566 of 8f3dA
Sites not aligning to the query:
4g2rB Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor haloxyfop from mycobacterium tuberculosis (see paper)
28% identity, 81% coverage: 77:495/517 of query aligns to 28:433/441 of 4g2rB
8jxmC Human 3-methylcrotonyl-coa carboxylase in bccp-h2 state with mcoa
29% identity, 84% coverage: 3:438/517 of query aligns to 25:433/520 of 8jxmC
Sites not aligning to the query:
6tzvA Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor phenyl-cyclodiaone from mycobacterium tuberculosis
27% identity, 81% coverage: 77:495/517 of query aligns to 29:418/426 of 6tzvA
6prwA Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor quizalofop-p derivative from mycobacterium tuberculosis
27% identity, 81% coverage: 77:495/517 of query aligns to 29:418/426 of 6prwA
>WP_028313592.1 NCBI__GCF_000429905.1:WP_028313592.1
MSERMNEAINRLAEIQKQNLLGGGQKHVDRQHARNKMTARERIDALLDPGTFLEVGSCVN
TTSVRMDGRTTDAPCDGAITGTGKVDGRLIGVYSSDFTVLGGSLGAQHLQKCSEWIIQCT
KLGIPMVWLLDSSGGRLGYQDVMFAGIEWYFCTISRSSGVVPQINVLMGPCIAGQAYAPT
LCDFLLMSRETANLWLAGPRQAKAATSEDIDKSVGSADYHVAHSGTCDVVGDNDAETIAK
TRELLSYLPSNFREKPPVKEAPADSLCDVDKLLELVPDDLAKTYDMHEVIKVLVDDGDYF
EVKDQYAKNLICCFARMDGKPVGIVANNPAEPGSIMEINSCDKYYRFLQVLDAFNIPLVT
LVDTPPFVPGEEQEEKGLLRHFGKIVDVYTTSTIPKISIVLREAYADAGAMIMGVSKGMG
ADAALAWPIAQYAVEASELDYREVVKGMEDDAYEGYLNWGREKTDVFDVARGFTTQVVDE
IIHPKETRKRIIQSLELFKNKEEELPLRAKCHGTMPS
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory