Comparing WP_028320507.1 NCBI__GCF_000422285.1:WP_028320507.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P36204 Bifunctional PGK/TIM; EC 2.7.2.3; EC 5.3.1.1 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see paper)
51% identity, 96% coverage: 2:248/257 of query aligns to 400:643/654 of P36204
Sites not aligning to the query:
P00943 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Geobacillus stearothermophilus (Bacillus stearothermophilus) (see 2 papers)
49% identity, 97% coverage: 4:252/257 of query aligns to 2:248/253 of P00943
1btmA Triosephosphate isomerase (tim) complexed with 2-phosphoglycolic acid (see paper)
49% identity, 97% coverage: 4:252/257 of query aligns to 1:247/251 of 1btmA
P27876 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Bacillus subtilis (strain 168) (see paper)
46% identity, 97% coverage: 4:252/257 of query aligns to 2:248/253 of P27876
4y96A Crystal structure of triosephosphate isomerase from gemmata obscuriglobus (see paper)
50% identity, 97% coverage: 4:252/257 of query aligns to 2:247/250 of 4y96A
6neeB Crystal structure of a reconstructed ancestor of triosephosphate isomerase from eukaryotes (see paper)
47% identity, 99% coverage: 1:255/257 of query aligns to 1:252/252 of 6neeB
3uwzA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with glycerol-2-phosphate (see paper)
41% identity, 97% coverage: 4:252/257 of query aligns to 3:251/254 of 3uwzA
3uwwA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with 3-phosphoglyceric acid (see paper)
41% identity, 97% coverage: 4:252/257 of query aligns to 3:251/254 of 3uwwA
3uwvA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with 2-phosphoglyceric acid (see paper)
41% identity, 97% coverage: 4:252/257 of query aligns to 4:252/255 of 3uwvA
3uwuA Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with glycerol-3-phosphate (see paper)
41% identity, 97% coverage: 4:252/257 of query aligns to 2:250/253 of 3uwuA
Q6GIL6 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Staphylococcus aureus (strain MRSA252) (see paper)
41% identity, 97% coverage: 4:252/257 of query aligns to 2:250/253 of Q6GIL6
6oogA Crystal structure of triosephosphate isomerase from taenia solium in complex with 2pg (see paper)
44% identity, 99% coverage: 2:255/257 of query aligns to 3:252/252 of 6oogA
P9WG43 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
46% identity, 96% coverage: 2:247/257 of query aligns to 1:248/261 of P9WG43
3taoA Structure of mycobacterium tuberculosis triosephosphate isomerase bound to phosphoglycolohydroxamate (see paper)
46% identity, 95% coverage: 4:247/257 of query aligns to 2:247/256 of 3taoA
6ooiC Crystal structure of triosephosphate isomerase from schistosoma mansoni in complex with 2pg (see paper)
46% identity, 98% coverage: 4:255/257 of query aligns to 8:255/255 of 6ooiC
5zfxB Crystal structure of triosephosphate isomerase from opisthorchis viverrini (see paper)
46% identity, 94% coverage: 4:245/257 of query aligns to 1:239/248 of 5zfxB
4mvaA 1.43 angstrom resolution crystal structure of triosephosphate isomerase (tpia) from escherichia coli in complex with acetyl phosphate. (see paper)
46% identity, 97% coverage: 4:252/257 of query aligns to 2:247/255 of 4mvaA
B1XB85 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Escherichia coli (strain K12 / DH10B) (see paper)
46% identity, 97% coverage: 4:252/257 of query aligns to 2:247/255 of B1XB85
6bveA Triosephosphate isomerase of synechocystis in complex with 2- phosphoglycolic acid (see paper)
43% identity, 98% coverage: 4:254/257 of query aligns to 2:241/242 of 6bveA
3uwzB Crystal structure of staphylococcus aureus triosephosphate isomerase complexed with glycerol-2-phosphate (see paper)
40% identity, 97% coverage: 4:252/257 of query aligns to 2:247/250 of 3uwzB
>WP_028320507.1 NCBI__GCF_000422285.1:WP_028320507.1
MIERRPMIAGNWKMYTDIFESVNLVKAVSAGLRGDEEADVLVAPPFTNLSVVKPFAENAR
ILLGAQNMHWEGSGAFTGEVSGSMLRAAGCTHVILGHSERRHIFGESDADVNRKVEAAAK
SGLIPILCIGETLEEREAGRTFEVIAGQLAGSLAAYTAERDLPAETIVAYEPVWAIGTGR
TATPAQAQEVHRSIRRWLGERFGEKISEHTRILYGGSVKPDNISALMSEQDIDGALVGGA
SLKAESFLGIVQFRKKG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory