Comparing WP_029000136.1 NCBI__GCF_000430725.1:WP_029000136.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
Q9A9Z2 D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) (Caulobacter crescentus) (see 2 papers)
75% identity, 100% coverage: 2:593/593 of query aligns to 7:595/595 of Q9A9Z2
5oynA Crystal structure of d-xylonate dehydratase in holo-form (see paper)
75% identity, 100% coverage: 2:593/593 of query aligns to 1:589/589 of 5oynA
7m3kA Crystal structure of galactonate dehydratase from brucella melitensis biovar abortus 2308
60% identity, 97% coverage: 9:586/593 of query aligns to 2:582/587 of 7m3kA
B5ZZ34 L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum bv. trifolii (strain WSM2304) (see 2 papers)
43% identity, 97% coverage: 1:577/593 of query aligns to 1:565/579 of B5ZZ34
9evvD His579leu variant of l-arabinonate dehydratase co-crystallized with 2- oxobutyrate (see paper)
43% identity, 96% coverage: 7:577/593 of query aligns to 5:561/575 of 9evvD
9evvA His579leu variant of l-arabinonate dehydratase co-crystallized with 2- oxobutyrate (see paper)
43% identity, 96% coverage: 7:577/593 of query aligns to 5:561/575 of 9evvA
5j85A Ser480ala mutant of l-arabinonate dehydratase (see paper)
43% identity, 96% coverage: 7:577/593 of query aligns to 6:562/576 of 5j85A
Q1JUQ1 L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense (see paper)
43% identity, 99% coverage: 9:593/593 of query aligns to 8:583/583 of Q1JUQ1
8epzA Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn
42% identity, 98% coverage: 10:593/593 of query aligns to 4:569/569 of 8epzA
8ej0A Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mg (see paper)
42% identity, 98% coverage: 10:593/593 of query aligns to 3:568/568 of 8ej0A
8hs0A The mutant structure of dhad v178w (see paper)
31% identity, 87% coverage: 35:549/593 of query aligns to 39:543/570 of 8hs0A
9jpiA The complex structure of dhad with aspterric acid (aa). (see paper)
31% identity, 87% coverage: 35:549/593 of query aligns to 39:543/570 of 9jpiA
Sites not aligning to the query:
Q9LIR4 Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
31% identity, 87% coverage: 35:549/593 of query aligns to 77:581/608 of Q9LIR4
6ovtA Crystal structure of ilvd from mycobacterium tuberculosis (see paper)
33% identity, 88% coverage: 30:550/593 of query aligns to 21:537/562 of 6ovtA
P9WKJ5 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
33% identity, 88% coverage: 30:550/593 of query aligns to 34:550/575 of P9WKJ5
8imuA Dihydroxyacid dehydratase (dhad) mutant-v497f (see paper)
29% identity, 87% coverage: 35:549/593 of query aligns to 36:496/523 of 8imuA
>WP_029000136.1 NCBI__GCF_000430725.1:WP_029000136.1
MDKKPQRPFRSREWFADPHRSDMTALYLERFMNYGITPDELRCGKPIIGIAQTGSDLSPC
NRIHLELAKRVRDGIRDAGGIPMEFPVHPIFENCRRPTAALDRNLAYLGLVEILYGYPID
AVVLTTGCDKTTPAGIMAASTVDIPAIVLSGGPMLDGWHEGELVGSGTVIWRSRRKLAAG
EIDEEEFLQRACDSAPSAGHCNTMGTASTMNAVAEALGLSLPGCAAIPAPYRQRGQMAYD
TGRRIVEMAYEDLRPSRLLTRESFLNALSVVSCCGGSSNAQVHLMAMARHADVELRPSDW
TEHAYDLPLLVNMQPAGKYLGERFYRAGGVPAVMWELQQAGKLHGDCLTVTGRSIAQNLE
GREATDREVIRPFADPLLEAAGFLVLSGNLFDFGIMKTSVISERFRSRYLSRPGLEGVFE
ARAIVFEGSDDYHARINDPSLDIDEGCILVMRGAGPIGWPGSAEVVNMQPPDALIRRGIE
TLPTLGDGRQSGTADSPSILNCSPESAVGGGLAWLRTGDMICIDLNAGTCNAQVAPEEIE
RRKRELPKPPVPESHSPWEELYRQKTGQLAEGATLEFALKYRRIAQKTPRHNH
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory