Comparing WP_029133287.1 NCBI__GCF_000428045.1:WP_029133287.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P23533 Phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase system, enzyme I; EC 2.7.3.9 from Staphylococcus carnosus (strain TM300) (see paper)
35% identity, 75% coverage: 173:739/754 of query aligns to 1:568/573 of P23533
P08839 Phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase system, enzyme I; EC 2.7.3.9 from Escherichia coli (strain K12) (see 2 papers)
35% identity, 75% coverage: 177:743/754 of query aligns to 2:571/575 of P08839
2hwgA Structure of phosphorylated enzyme i of the phosphoenolpyruvate:sugar phosphotransferase system (see paper)
35% identity, 75% coverage: 177:743/754 of query aligns to 1:570/572 of 2hwgA
2wqdA Crystal structure of enzyme i of the phosphoenolpyruvate:sugar phosphotransferase system in the dephosphorylated state (see paper)
33% identity, 75% coverage: 174:737/754 of query aligns to 1:566/570 of 2wqdA
2xz7A Crystal structure of the phosphoenolpyruvate-binding domain of enzyme i in complex with phosphoenolpyruvate from the thermoanaerobacter tengcongensis pep-sugar phosphotransferase system (pts) (see paper)
47% identity, 42% coverage: 426:738/754 of query aligns to 5:318/324 of 2xz7A
2xz9A Crystal structure from the phosphoenolpyruvate-binding domain of enzyme i in complex with pyruvate from the thermoanaerobacter tengcongensis pep-sugar phosphotransferase system (pts) (see paper)
47% identity, 41% coverage: 429:738/754 of query aligns to 1:311/317 of 2xz9A
Q02KR1 Phosphoenolpyruvate synthase; PEP synthase; Pyruvate, water dikinase; EC 2.7.9.2 from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
26% identity, 48% coverage: 347:709/754 of query aligns to 403:783/791 of Q02KR1
5lu4A C4-type pyruvate phosphate dikinase: conformational intermediate of central domain in the swiveling mechanism (see paper)
24% identity, 46% coverage: 350:698/754 of query aligns to 444:836/850 of 5lu4A
Sites not aligning to the query:
P22983 Pyruvate, phosphate dikinase; Pyruvate, orthophosphate dikinase; EC 2.7.9.1 from Clostridium symbiosum (Bacteroides symbiosus) (see 4 papers)
24% identity, 51% coverage: 313:698/754 of query aligns to 407:855/874 of P22983
Sites not aligning to the query:
1kc7A Pyruvate phosphate dikinase with bound mg-phosphonopyruvate (see paper)
24% identity, 51% coverage: 313:698/754 of query aligns to 406:854/872 of 1kc7A
Sites not aligning to the query:
5jvjB C4-type pyruvate phosphate dikinase: different conformational states of the nucleotide binding domain in the dimer (see paper)
23% identity, 46% coverage: 350:698/754 of query aligns to 371:781/797 of 5jvjB
Sites not aligning to the query:
O23404 Pyruvate, phosphate dikinase 1, chloroplastic; Pyruvate, orthophosphate dikinase 1; EC 2.7.9.1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
24% identity, 48% coverage: 334:698/754 of query aligns to 524:946/963 of O23404
1vbgA Pyruvate phosphate dikinase from maize (see paper)
25% identity, 46% coverage: 351:698/754 of query aligns to 445:858/874 of 1vbgA
Sites not aligning to the query:
5jvlA C4-type pyruvate phospate dikinase: nucleotide binding domain with bound atp analogue (see paper)
23% identity, 46% coverage: 350:698/754 of query aligns to 444:858/874 of 5jvlA
Sites not aligning to the query:
Q39735 Pyruvate, phosphate dikinase, chloroplastic; Cold-sensitive pyruvate, orthophosphate dikinase; Pyruvate, orthophosphate dikinase; EC 2.7.9.1 from Flaveria bidentis (Coastal plain yellowtops) (Ethulia bidentis) (see 2 papers)
23% identity, 46% coverage: 350:698/754 of query aligns to 523:937/953 of Q39735
Sites not aligning to the query:
P11155 Pyruvate, phosphate dikinase 1, chloroplastic; Pyruvate, orthophosphate dikinase 1; EC 2.7.9.1 from Zea mays (Maize) (see 7 papers)
24% identity, 46% coverage: 351:698/754 of query aligns to 518:931/947 of P11155
Sites not aligning to the query:
1vbhA Pyruvate phosphate dikinase with bound mg-pep from maize (see paper)
25% identity, 47% coverage: 342:698/754 of query aligns to 421:846/862 of 1vbhA
Sites not aligning to the query:
5jvlB C4-type pyruvate phospate dikinase: nucleotide binding domain with bound atp analogue (see paper)
23% identity, 46% coverage: 355:698/754 of query aligns to 114:504/520 of 5jvlB
Sites not aligning to the query:
P37349 PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM; Dihydroxyacetone kinase subunit M; EC 2.7.1.121 from Escherichia coli (strain K12) (see paper)
25% identity, 25% coverage: 187:371/754 of query aligns to 256:439/472 of P37349
Sites not aligning to the query:
2y8hA Structure of the first gaf domain e87g mutant of mycobacterium tuberculosis doss (see paper)
31% identity, 17% coverage: 16:140/754 of query aligns to 5:130/152 of 2y8hA
>WP_029133287.1 NCBI__GCF_000428045.1:WP_029133287.1
MLEILHRIVQEVNAAPDLGEALKLIVQRVKQAIKADVCSVYLTDFDRREHVLLATEGLRQ
EAVGKVSLPMHRGLVGLVCERAEPVNLDDATEHPRYLFIHATGETQYRGFLGVPIIQNRK
VLGVLVVRQVQSRKFDDNEVTFLFTLAAQLAGAITYARASGELTQLQPTRSPLNRYLSGQ
PSAPGVVTGKAVVAYQLADLDAVPDRTTENIQSEVTAFKEAVAMTRQELKSLKERLSTEL
PVEEQALFDALLLMLGSDALVSQTVERIEQGQWAQSALRHTIEIHARVFDNMDDVYLRER
ASDIRDLGRRILMHLQLDKPREIHYPEKTILVGDDISAVQLAEVPTERLAAIVSAKGSSS
SHVAILARAMGAPAVMGVTDLPVGRLEGLEIIVDGYRGRVYVSPDPSVSDEYARLAKEES
EISRDLEAMKGLKAETTDGVTVPLYLNTGLISDVMTVGLEESEGVGLHRTELLYIVRDRF
PGEEVQVESYQQMLSSFAPRPVILRTLDIGGDKPLPYFPFVESNPFLGWRGVRISLDHPE
IFLTQIRAMIRANIGLNNLQIMLPMISKVSEVDELQMLIQRAHDELLEENYDVVMPPVGV
MIEVPSAVYQIDEIARRVDFLSVGTNDLTQYLLAVDRNNPRVAAIFDDMHPAVLRALVQI
VEGAAIYRRPVSVCGELAGNPLAAVLLLGMGVDSLSMSAGSLLKIKWVIRSYSRARAKSL
LQAALRMTDARQVRELMEKSLDEMGLGGLVRPGK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory