Comparing WP_029133947.1 NCBI__GCF_000428045.1:WP_029133947.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1uskA L-leucine-binding protein with leucine bound (see paper)
37% identity, 90% coverage: 29:365/375 of query aligns to 1:335/345 of 1uskA
1usiA L-leucine-binding protein with phenylalanine bound (see paper)
37% identity, 90% coverage: 29:365/375 of query aligns to 1:335/345 of 1usiA
1z18A Crystal structure analysis of periplasmic leu/ile/val-binding protein with bound valine (see paper)
38% identity, 90% coverage: 29:364/375 of query aligns to 1:332/344 of 1z18A
1z17A Crystal structure analysis of periplasmic leu/ile/val-binding protein with bound ligand isoleucine (see paper)
38% identity, 90% coverage: 29:364/375 of query aligns to 1:332/344 of 1z17A
1z16A Crystal structure analysis of periplasmic leu/ile/val-binding protein with bound leucine (see paper)
38% identity, 90% coverage: 29:364/375 of query aligns to 1:332/344 of 1z16A
4n0qB Crystal structure of an abc transporter, substrate-binding protein from brucella melitensis 16m in complex with l-leucine using a crystal grown in a crystal former (microlytic)
35% identity, 91% coverage: 31:372/375 of query aligns to 3:343/345 of 4n0qB
3ip9A Structure of atu2422-gaba receptor in complex with gaba (see paper)
34% identity, 90% coverage: 33:369/375 of query aligns to 5:338/348 of 3ip9A
3ip7A Structure of atu2422-gaba receptor in complex with valine (see paper)
34% identity, 90% coverage: 33:369/375 of query aligns to 5:338/348 of 3ip7A
3ip6A Structure of atu2422-gaba receptor in complex with proline (see paper)
34% identity, 90% coverage: 33:369/375 of query aligns to 5:338/348 of 3ip6A
3ip5A Structure of atu2422-gaba receptor in complex with alanine (see paper)
34% identity, 90% coverage: 33:369/375 of query aligns to 5:338/348 of 3ip5A
3ipcA Structure of atu2422-gaba f77a mutant receptor in complex with leucine (see paper)
34% identity, 90% coverage: 33:369/375 of query aligns to 5:338/348 of 3ipcA
4gnrA 1.0 angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein livj from streptococcus pneumoniae str. Canada mdr_19a in complex with isoleucine
33% identity, 86% coverage: 30:351/375 of query aligns to 2:321/348 of 4gnrA
3td9A Crystal structure of a leucine binding protein livk (tm1135) from thermotoga maritima msb8 at 1.90 a resolution
27% identity, 87% coverage: 30:357/375 of query aligns to 1:326/350 of 3td9A
4mlcA Abc transporter substrate-binding protein fromdesulfitobacterium hafniense
26% identity, 91% coverage: 29:371/375 of query aligns to 1:333/336 of 4mlcA
4q6bA Crystal structure of abc transporter substrate-binding protein fromdesulfitobacterium hafniense complex with leu
26% identity, 91% coverage: 29:371/375 of query aligns to 1:332/335 of 4q6bA
4q6wA Crystal structure of periplasmic binding protein type 1 from bordetella pertussis tohama i complexed with 3-hydroxy benzoic acid
26% identity, 83% coverage: 29:338/375 of query aligns to 2:332/376 of 4q6wA
4rdcA The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with proline
27% identity, 90% coverage: 29:367/375 of query aligns to 1:350/364 of 4rdcA
4qymA The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with methionine
27% identity, 90% coverage: 29:367/375 of query aligns to 1:350/364 of 4qymA
4otzA The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with cystein
27% identity, 90% coverage: 29:367/375 of query aligns to 1:350/364 of 4otzA
4og2A The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with leucine
27% identity, 90% coverage: 29:367/375 of query aligns to 1:350/364 of 4og2A
>WP_029133947.1 NCBI__GCF_000428045.1:WP_029133947.1
MKSIIVKKLLAATVGLSLAIPTMAIAADDTIKLGVAGAHSGDLASYGLPTVNAAKLVVAD
VNARGGINGKQVELLVEDDVCKPEVATNTATKLVSSGVHVVLGHICSGATKAALPIYKNA
GVIVMSPSATNPELTQSGDYPNFFRTIASDDAQAKTQVDFALDNRNLKKIAVIHDKGDYG
KGLAEFAKQFIEKSGNAEVVLFEGVTPGAVDYSAVVQKIKRSGADGVIYGGYHPEASKIV
TQMRKKRIDIDFISGDGVKDDTFIKVAGKSAEGVYATGAKDNSSNPLYTAAIEAHKKTYG
EDPGAFFDSAHAAAAALLNAVEKAGSTDTAAITNALQANDVATTVGNIHFDERGDAVGVG
FAVYQVQNGQYVEVK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory