SitesBLAST
Comparing WP_029907864.1 NCBI__GCF_000711315.1:WP_029907864.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7cqwA Gmas/adp complex-conformation 1 (see paper)
39% identity, 95% coverage: 15:445/453 of query aligns to 9:423/430 of 7cqwA
7cquA Gmas/adp/metsox-p complex (see paper)
39% identity, 95% coverage: 15:445/453 of query aligns to 8:422/429 of 7cquA
- binding adenosine-5'-diphosphate: E121 (= E129), Y173 (= Y184), N187 (≠ D198), W188 (≠ F199), D189 (≠ Q200), Y190 (= Y201), H236 (≠ N247), L237 (≠ M248), S238 (= S249), R316 (= R333), R322 (= R340)
- binding magnesium ion: E121 (= E129), E121 (= E129), E123 (= E131), E178 (= E189), E185 (= E196), E185 (= E196), H234 (= H245), E324 (= E342)
- binding l-methionine-s-sulfoximine phosphate: E121 (= E129), E123 (= E131), E178 (= E189), E185 (= E196), T229 (= T240), G230 (= G241), H234 (= H245), R287 (= R304), W299 (= W316), R311 (= R328), R326 (= R344)
7cqqA Gmas in complex with amppnp and metsox (see paper)
39% identity, 95% coverage: 15:445/453 of query aligns to 8:422/429 of 7cqqA
- binding phosphoaminophosphonic acid-adenylate ester: E121 (= E129), Y173 (= Y184), E185 (= E196), N187 (≠ D198), D189 (≠ Q200), Y190 (= Y201), H234 (= H245), H236 (≠ N247), S238 (= S249), R311 (= R328), R316 (= R333), R322 (= R340), E324 (= E342)
- binding magnesium ion: E121 (= E129), E121 (= E129), E123 (= E131), E178 (= E189), E185 (= E196), E185 (= E196), H234 (= H245), E324 (= E342)
- binding (2s)-2-amino-4-(methylsulfonimidoyl)butanoic acid: E123 (= E131), E178 (= E189), T229 (= T240), H234 (= H245), R287 (= R304), W299 (= W316), R311 (= R328), R326 (= R344)
7cqnA Gmas in complex with amppcp (see paper)
39% identity, 95% coverage: 15:445/453 of query aligns to 8:422/429 of 7cqnA
- binding phosphomethylphosphonic acid adenylate ester: G45 (≠ L52), D61 (≠ E69), E121 (= E129), Y173 (= Y184), Q174 (≠ S185), W188 (≠ F199), D189 (≠ Q200), Y190 (= Y201), H236 (≠ N247), S238 (= S249), R311 (= R328), R316 (= R333), R322 (= R340)
7tf6A Glutamine synthetase (see paper)
36% identity, 96% coverage: 15:449/453 of query aligns to 12:434/438 of 7tf6A
- binding glutamine: E128 (= E131), E183 (= E189), G235 (= G241), H239 (= H245), R292 (= R304), E298 (≠ D310)
- binding magnesium ion: E126 (= E129), E128 (= E131), E183 (= E189), E190 (= E196), H239 (= H245), E327 (= E342)
- binding : F58 (≠ L61), R60 (= R64), G232 (≠ D238), N234 (≠ T240), G296 (≠ Q308), Y297 (≠ G309), R310 (= R328), Y367 (= Y382), Y421 (≠ E436), Q433 (≠ R448)
Sites not aligning to the query:
7tdvC Glutamine synthetase (see paper)
36% identity, 96% coverage: 15:449/453 of query aligns to 13:439/443 of 7tdvC
- binding adenosine-5'-diphosphate: G129 (= G127), E131 (= E129), E183 (≠ Y184), D197 (= D198), F198 (= F199), K199 (≠ Q200), Y200 (= Y201), N246 (= N247), V247 (≠ M248), S248 (= S249), R320 (= R333), S328 (vs. gap), R330 (= R340)
- binding magnesium ion: E131 (= E129), E131 (= E129), E133 (= E131), E188 (= E189), E195 (= E196), E195 (= E196), H244 (= H245), E332 (= E342)
- binding l-methionine-s-sulfoximine phosphate: E131 (= E129), E133 (= E131), E188 (= E189), E195 (= E196), G240 (= G241), H244 (= H245), R297 (= R304), E303 (≠ D310), R315 (= R328)
8tfkA Glutamine synthetase (see paper)
35% identity, 96% coverage: 15:449/453 of query aligns to 11:436/440 of 8tfkA
- binding adenosine-5'-diphosphate: E128 (= E129), D194 (= D198), F195 (= F199), F197 (≠ Y201), N243 (= N247), R312 (= R328), R317 (= R333), G325 (= G338), R327 (= R340)
- binding magnesium ion: E128 (= E129), E128 (= E129), E130 (= E131), E185 (= E189), E192 (= E196), E192 (= E196), H241 (= H245), E329 (= E342)
- binding l-methionine-s-sulfoximine phosphate: E128 (= E129), E130 (= E131), E185 (= E189), E192 (= E196), G237 (= G241), H241 (= H245), R294 (= R304), E300 (≠ D310), R312 (= R328), R331 (= R344)
8ufjB Glutamine synthetase (see paper)
35% identity, 96% coverage: 15:449/453 of query aligns to 15:440/444 of 8ufjB
P12425 Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis (strain 168) (see 5 papers)
34% identity, 96% coverage: 15:449/453 of query aligns to 14:440/444 of P12425
- G59 (= G60) mutation to R: Unable to form stable complex with TnrA. In the presence of glutamine, this mutant derepresses amtB-lacZ fusion and glnRA-lacZ fusion.
- R62 (= R64) Important for inhibition by glutamine; mutation to A: Highly resistant to inhibition by glutamine and AMP. Regulation by TnrA and GlnR is abolished. Only small differences (less than 2-fold) in its steady-state kinetic constants compared with the wild-type. Similar sensitivity to Met-Sox that compared to the wild-ytpe.
- E132 (= E129) binding Mg(2+)
- E134 (= E131) binding Mg(2+)
- E189 (= E189) binding Mg(2+)
- V190 (≠ D190) mutation to A: Unable to form stable complex with TnrA. In the presence of glutamine, this mutant partially relieves expression of the glnRA-lacZ fusion, but has no effect on the TnrA-dependent regulation of amtB-lacZ fusion. Resistant to inhibition by MetSox.
- E196 (= E196) binding Mg(2+)
- G241 (= G241) binding L-glutamate
- H245 (= H245) binding Mg(2+)
- G302 (≠ Q308) mutation to E: Unable to form stable complex with TnrA. In the presence of glutamine, amtB-lacZ fusion is only 4-fold regulated by TnrA, whereas glnRA-lacZ fusion is derepressed. This mutant retains enzymatic specific activity with a 2-fold decrease of the affinity for glutamate and glutamine compared to the wild-type. Slightly less sensitive to inhibition by glutamine.
- E304 (≠ D310) mutation to A: Highly resistant to Met-Sox inhibition. 8- and 2-fold increase of the affinity for glutamate and ATP, respectively. Strong decrease of the affinity for ammonium.
- P306 (= P318) mutation to H: Unable to form stable complex with TnrA. In the presence of glutamine, this mutant completely derepresses glnRA-lacZ fusion, whereas amtB-lacZ fusion expression is only partially derepresses.
- E333 (= E342) binding Mg(2+)
- E424 (= E433) mutation to K: Unable to form stable complex with TnrA. In the presence of glutamine, this mutant derepresses amtB-lacZ fusion and glnRA-lacZ fusion. Although it is defective in regulation, this mutant retains enzymatic specific activity and similar affinity for ATP, glutamate and glutamine compared to the wild-type. Slightly less sensitive to inhibition by glutamine.
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
4lnkA B. Subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: structure of gs-glutamate-amppcp complex (see paper)
34% identity, 96% coverage: 15:449/453 of query aligns to 13:439/443 of 4lnkA
- active site: D52 (≠ T54), E131 (= E129), E133 (= E131), E188 (= E189), E195 (= E196), H244 (= H245), R315 (= R328), E332 (= E342), R334 (= R344)
- binding adenosine-5'-diphosphate: K43 (≠ H45), M50 (≠ L52), F198 (= F199), Y200 (= Y201), N246 (= N247), S248 (= S249), S324 (≠ G337), S328 (vs. gap), R330 (= R340)
- binding glutamic acid: E133 (= E131), E188 (= E189), V189 (≠ D190), N239 (≠ T240), G240 (= G241), G242 (= G243), E303 (≠ D310)
- binding magnesium ion: E131 (= E129), E188 (= E189), E195 (= E196), H244 (= H245), E332 (= E342)
4lniA B. Subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: structure of the transition state complex (see paper)
34% identity, 96% coverage: 15:449/453 of query aligns to 13:439/443 of 4lniA