Comparing WP_034998568.1 NCBI__GCF_000745425.1:WP_034998568.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8gqmA Crystal structure of thiolase complexed with acetyl coenzyme a
64% identity, 99% coverage: 4:377/378 of query aligns to 3:374/377 of 8gqmA
2d3tC Fatty acid beta-oxidation multienzyme complex from pseudomonas fragi, form v (see paper)
46% identity, 99% coverage: 4:376/378 of query aligns to 7:388/390 of 2d3tC
P45359 Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; CaTHL; EC 2.3.1.9 from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W) (see paper)
43% identity, 100% coverage: 1:378/378 of query aligns to 1:392/392 of P45359
4xl4A Crystal structure of thiolase from clostridium acetobutylicum in complex with coa (see paper)
43% identity, 100% coverage: 1:378/378 of query aligns to 1:392/392 of 4xl4A
2vu2A Biosynthetic thiolase from z. Ramigera. Complex with s-pantetheine-11- pivalate. (see paper)
41% identity, 95% coverage: 19:377/378 of query aligns to 16:388/389 of 2vu2A
1dm3A Acetylated biosynthetic thiolase from zoogloea ramigera in complex with acetyl-coa (see paper)
41% identity, 95% coverage: 19:377/378 of query aligns to 16:388/389 of 1dm3A
1dlvA Biosynthetic thiolase from zoogloea ramigera in complex with coa (see paper)
41% identity, 95% coverage: 19:377/378 of query aligns to 16:388/389 of 1dlvA
P07097 Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Shinella zoogloeoides (Crabtreella saccharophila) (see 2 papers)
41% identity, 95% coverage: 19:377/378 of query aligns to 19:391/392 of P07097
2vu1A Biosynthetic thiolase from z. Ramigera. Complex of with o-pantheteine- 11-pivalate. (see paper)
41% identity, 95% coverage: 19:377/378 of query aligns to 18:390/391 of 2vu1A
1ou6A Biosynthetic thiolase from zoogloea ramigera in complex with acetyl-o- pantetheine-11-pivalate
41% identity, 95% coverage: 19:377/378 of query aligns to 19:391/392 of 1ou6A
4c2jD Crystal structure of human mitochondrial 3-ketoacyl-coa thiolase in complex with coa (see paper)
39% identity, 99% coverage: 4:377/378 of query aligns to 10:394/395 of 4c2jD
2wkuA Biosynthetic thiolase from z. Ramigera. The n316h mutant. (see paper)
41% identity, 95% coverage: 19:377/378 of query aligns to 16:388/389 of 2wkuA
Sites not aligning to the query:
1m1oA Crystal structure of biosynthetic thiolase, c89a mutant, complexed with acetoacetyl-coa (see paper)
41% identity, 95% coverage: 19:377/378 of query aligns to 17:389/390 of 1m1oA
Q56WD9 3-ketoacyl-CoA thiolase 2, peroxisomal; Acetyl-CoA acyltransferase 2; Beta-ketothiolase 2; Peroxisomal 3-oxoacyl-CoA thiolase 2; Peroxisome defective protein 1; EC 2.3.1.16 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
39% identity, 99% coverage: 4:376/378 of query aligns to 52:437/462 of Q56WD9
P42765 3-ketoacyl-CoA thiolase, mitochondrial; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; Acyl-CoA hydrolase, mitochondrial; Beta-ketothiolase; Mitochondrial 3-oxoacyl-CoA thiolase; T1; EC 2.3.1.16; EC 2.3.1.9; EC 3.1.2.-; EC 3.1.2.1; EC 3.1.2.2 from Homo sapiens (Human) (see paper)
38% identity, 99% coverage: 4:377/378 of query aligns to 7:395/397 of P42765
6pccA Crystal structure of beta-ketoadipyl-coa thiolase mutant (h356a) in complex hexanoyl coenzyme a (see paper)
42% identity, 99% coverage: 1:376/378 of query aligns to 4:401/403 of 6pccA
6pcbA Crystal structure of beta-ketoadipyl-coa thiolase mutant (h356a) in complex with coa (see paper)
42% identity, 99% coverage: 1:376/378 of query aligns to 4:401/403 of 6pcbA
8oqlC Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-1
39% identity, 97% coverage: 10:376/378 of query aligns to 10:395/397 of 8oqlC
Sites not aligning to the query:
8oqmD Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-m-10
39% identity, 97% coverage: 10:376/378 of query aligns to 11:397/399 of 8oqmD
Sites not aligning to the query:
8opyD Structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with fragment-b-dnq
39% identity, 97% coverage: 10:376/378 of query aligns to 11:399/401 of 8opyD
>WP_034998568.1 NCBI__GCF_000745425.1:WP_034998568.1
MSKVVIAGYLRSPFTLAKKGELATVRPDDLAAQVIKGLVAKTGIPAEDIEDLLLGCAFPE
GEQGFNIARLVSFIAGLPLSIAAATVNRFCGSSMTTIHMAAGAIQMNAGNAFVAAGVESM
SRVPMMGFNPLPNPELAASMPGAYMGMGDTAENVAAKWTISRKEQEEFALRSHQRATAAQ
KEGRLTDEIVAIAGRKGTIMLDGCIRPETTLEGLAELKPAFSANGVVTAGTSSPLTDGAA
AVLVCSEDYAKQHKLDVLASIKAIAVSGCSPEIMGIGPVAASRKALARAGLEVSQIDIVE
LNEAFASQSIACMRELNLSVDRVNIDGGAIALGHPLGATGARIVGKAASLLKREKGKYAL
ATQCIGGGQGIATVLEAC
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory