SitesBLAST
Comparing WP_035133638.1 NCBI__GCF_000769915.1:WP_035133638.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
6pfkA Phosphofructokinase, inhibited t-state (see paper)
51% identity, 99% coverage: 5:328/328 of query aligns to 1:319/319 of 6pfkA
- active site: G11 (= G15), R72 (= R76), C73 (≠ S77), D103 (≠ N107), G104 (= G108), G124 (= G129), T125 (= T130), D127 (= D132), D129 (= D134), R171 (= R176)
- binding 2-phosphoglycolic acid: R21 (= R25), R25 (= R29), G58 (≠ N62), D59 (≠ N63), R154 (= R159), R211 (≠ S216), K213 (= K218)
P00512 ATP-dependent 6-phosphofructokinase; ATP-PFK; Phosphofructokinase; Phosphohexokinase; EC 2.7.1.11 from Geobacillus stearothermophilus (Bacillus stearothermophilus) (see 2 papers)
51% identity, 99% coverage: 5:328/328 of query aligns to 1:319/319 of P00512
- RSVVR 21:25 (≠ RAVVR 25:29) binding ADP
- D59 (≠ N63) binding ADP
- RC 72:73 (≠ RS 76:77) binding ATP
- D103 (≠ N107) binding Mg(2+)
- TID 125:127 (= TID 130:132) binding in other chain
- R154 (= R159) binding in other chain
- R162 (= R167) binding substrate
- MGR 169:171 (= MGR 174:176) binding in other chain
- GAE 185:187 (= GAE 190:192) binding in other chain
- R211 (≠ S216) binding in other chain
- KKH 213:215 (≠ KSS 218:220) binding in other chain
- E222 (= E227) binding in other chain
- R243 (= R252) binding substrate
- HVQR 249:252 (≠ HMQR 258:261) binding in other chain
1mtoA Crystal structure of a phosphofructokinase mutant from bacillus stearothermophilus bound with fructose-6-phosphate (see paper)
51% identity, 99% coverage: 5:328/328 of query aligns to 1:319/319 of 1mtoA
- active site: G11 (= G15), R72 (= R76), C73 (≠ S77), D103 (≠ N107), G104 (= G108), G124 (= G129), T125 (= T130), D127 (= D132), D129 (= D134), R171 (= R176)
- binding 6-O-phosphono-beta-D-fructofuranose: D127 (= D132), R162 (= R167), M169 (= M174), R171 (= R176), E222 (= E227), R243 (= R252), H249 (= H258), R252 (= R261)
4pfkA Phosphofructokinase. Structure and control (see paper)
51% identity, 99% coverage: 5:328/328 of query aligns to 1:319/319 of 4pfkA
- active site: G11 (= G15), R72 (= R76), C73 (≠ S77), D103 (≠ N107), G104 (= G108), G124 (= G129), T125 (= T130), D127 (= D132), D129 (= D134), R171 (= R176)
- binding adenosine-5'-diphosphate: S9 (= S13), Y41 (= Y45), R72 (= R76), C73 (≠ S77), F76 (= F80), K77 (≠ M81), G104 (= G108), G108 (= G112), R154 (= R159), G185 (= G190), R211 (≠ S216), G212 (= G217), K213 (= K218), H215 (≠ S220)
- binding 6-O-phosphono-beta-D-fructofuranose: D127 (= D132), M169 (= M174), E222 (= E227), H249 (= H258), R252 (= R261)
- binding magnesium ion: G185 (= G190), E187 (= E192)
3pfkA Phosphofructokinase. Structure and control (see paper)
51% identity, 99% coverage: 5:328/328 of query aligns to 1:319/319 of 3pfkA
- active site: G11 (= G15), R72 (= R76), C73 (≠ S77), D103 (≠ N107), G104 (= G108), G124 (= G129), T125 (= T130), D127 (= D132), D129 (= D134), R171 (= R176)
- binding phosphate ion: R154 (= R159), K213 (= K218), H249 (= H258), R252 (= R261)
4i4iA Crystal structure of bacillus stearothermophilus phosphofructokinase mutant t156a bound to pep (see paper)
51% identity, 99% coverage: 5:328/328 of query aligns to 1:319/319 of 4i4iA
- active site: G11 (= G15), R72 (= R76), C73 (≠ S77), D103 (≠ N107), G104 (= G108), G124 (= G129), T125 (= T130), D127 (= D132), D129 (= D134), R171 (= R176)
- binding phosphoenolpyruvate: R21 (= R25), R25 (= R29), G58 (≠ N62), R154 (= R159), R211 (≠ S216), K213 (= K218), H215 (≠ S220)
5xzaA Crystal structure of phosphofructokinase from staphylococcus aureus in complex with adp (see paper)
49% identity, 99% coverage: 5:328/328 of query aligns to 1:322/322 of 5xzaA
Q2FXM8 ATP-dependent 6-phosphofructokinase; ATP-PFK; Phosphofructokinase; Phosphohexokinase; EC 2.7.1.11 from Staphylococcus aureus (strain NCTC 8325 / PS 47) (see paper)
49% identity, 99% coverage: 5:328/328 of query aligns to 1:322/322 of Q2FXM8
- RC 72:73 (≠ RS 76:77) binding ATP
- GDGS 102:105 (≠ GNGS 106:109) binding ATP
- TID 127:129 (= TID 130:132) binding in other chain
- G150 (≠ E153) mutation to D: Exhibits higher affinity for fructose 6-phosphate and higher catalytic activity with a loss of dimer conversion; in association with A-151.
- L151 (≠ A154) mutation to A: Exhibits higher affinity for fructose 6-phosphate and higher catalytic activity with a loss of tetramer-dimer conversion; in association with D-150.
- R164 (= R167) mutation to A: Complete loss of fructose 6-phosphate binding.
- MGR 171:173 (= MGR 174:176) binding in other chain
- E224 (= E227) binding in other chain
- R245 (= R252) mutation to A: Complete loss of fructose 6-phosphate binding.
- HVQR 251:254 (≠ HMQR 258:261) binding in other chain
5xz9A Crystal structure of phosphofructokinase from staphylococcus aureus in complex with adenylylimidodiphosphate, the atp analogue (see paper)
49% identity, 98% coverage: 5:327/328 of query aligns to 1:321/321 of 5xz9A
- binding adenosine-5'-triphosphate: S9 (= S13), Y41 (= Y45), C73 (≠ S77), F76 (= F80), K77 (≠ M81), G102 (= G106), D103 (≠ N107), G104 (= G108), S105 (= S109), R107 (≠ T111), G108 (= G112)
5xz6A Crystal structure of phosphofructokinase from staphylococcus aureus in complex with adenylylimidodiphosphate, the atp analogue (see paper)
50% identity, 92% coverage: 5:306/328 of query aligns to 1:299/318 of 5xz6A
5xz7A Crystal structure of phosphofructokinase from staphylococcus aureus in complex with adenylylimidodiphosphate, the atp analogue (see paper)
50% identity, 92% coverage: 5:306/328 of query aligns to 1:299/322 of 5xz7A
1pfkA Crystal structure of the complex of phosphofructokinase from escherichia coli with its reaction products (see paper)
48% identity, 90% coverage: 5:300/328 of query aligns to 2:292/320 of 1pfkA
- active site: G12 (= G15), R73 (= R76), F74 (≠ S77), D104 (≠ N107), G105 (= G108), G125 (= G129), T126 (= T130), D128 (= D132), D130 (= D134), R172 (= R176)
- binding adenosine-5'-diphosphate: G11 (= G14), R22 (= R25), R26 (= R29), Y56 (≠ R59), S59 (≠ N62), D60 (≠ N63), R73 (= R76), F74 (≠ S77), F77 (= F80), R78 (≠ M81), G103 (= G106), D104 (≠ N107), G105 (= G108), S106 (= S109), M108 (≠ T111), G109 (= G112), R155 (= R159), G213 (= G217), K214 (= K218), H216 (≠ S220)
- binding 1,6-di-O-phosphono-beta-D-fructofuranose: G12 (= G15), R73 (= R76), T126 (= T130), D128 (= D132), M170 (= M174), E223 (= E227), H250 (= H258), R253 (= R261)
- binding magnesium ion: G186 (= G190), E188 (= E192)
P0A796 ATP-dependent 6-phosphofructokinase isozyme 1; ATP-PFK 1; Phosphofructokinase 1; 6-phosphofructokinase isozyme I; Phosphohexokinase 1; Sedoheptulose-7-phosphate kinase; EC 2.7.1.11 from Escherichia coli (strain K12) (see 2 papers)
48% identity, 90% coverage: 5:300/328 of query aligns to 2:292/320 of P0A796
- G12 (= G15) binding ATP
- RGVVR 22:26 (≠ RAVVR 25:29) binding ADP
- RYSVSD 55:60 (≠ ARSVNN 58:63) binding ADP
- RF 73:74 (≠ RS 76:77) binding ATP
- GDGS 103:106 (≠ GNGS 106:109) binding ATP
- D104 (≠ N107) binding Mg(2+)
- TID 126:128 (= TID 130:132) binding in other chain
- D128 (= D132) active site, Proton acceptor; mutation to S: 18000-fold reduction of catalytic rate.
- R155 (= R159) binding in other chain
- R163 (= R167) binding substrate
- R172 (= R176) mutation to S: 3.4-fold reduction in turnover numbers.
- GCE 186:188 (≠ GAE 190:192) binding in other chain
- KKH 214:216 (≠ KSS 218:220) binding in other chain
- E223 (= E227) binding in other chain
- R244 (= R252) binding substrate
- HIQR 250:253 (≠ HMQR 258:261) binding in other chain
8w2hA Human liver phosphofructokinase-1 in the t-state conformation (see paper)
41% identity, 96% coverage: 6:319/328 of query aligns to 6:352/761 of 8w2hA
- binding adenosine-5'-triphosphate: G14 (= G14), G15 (= G15), Y45 (= Y45), R78 (= R76), C79 (≠ S77), F82 (= F80), G108 (= G106), D109 (≠ N107), G110 (= G108), S111 (= S109), G114 (= G112), I117 (= I115), Q187 (≠ S163), W217 (≠ E193), L218 (≠ I194)
Sites not aligning to the query:
- binding adenosine-5'-triphosphate: 372, 375, 376, 382, 409, 413, 446, 447, 451
- binding 1,6-di-O-phosphono-beta-D-fructofuranose: 460, 517, 519, 555, 562, 644, 650, 724
7lw1A Human phosphofructokinase-1 liver type bound to activator na-11 (see paper)
41% identity, 96% coverage: 6:319/328 of query aligns to 6:352/744 of 7lw1A
- binding adenosine-5'-diphosphate: R78 (= R76), C79 (≠ S77), T83 (≠ M81), G108 (= G106), G110 (= G108), S111 (= S109), G114 (= G112), I117 (= I115)
- binding 6-O-phosphono-beta-D-fructofuranose: I155 (= I131), D156 (= D132), R191 (= R167), M198 (= M174), R200 (= R176), E254 (= E227), R282 (= R252), H288 (= H258), R291 (= R261)
- binding N-{(11S)-2-[2-(5-hydroxypent-1-yn-1-yl)phenyl]-4H,10H-pyrazolo[5,1-c][1,4]benzoxazepin-7-yl}acetamide: M164 (≠ H140), F298 (= F268), I301 (≠ V271), K305 (≠ R275), N331 (≠ D298)
Sites not aligning to the query:
- binding 1,6-di-O-phosphono-beta-D-fructofuranose: 399, 460, 519, 555, 562, 618, 644, 650, 724
- binding N-{(11S)-2-[2-(5-hydroxypent-1-yn-1-yl)phenyl]-4H,10H-pyrazolo[5,1-c][1,4]benzoxazepin-7-yl}acetamide: 527, 532, 535, 568, 660, 730, 734
P17858 ATP-dependent 6-phosphofructokinase, liver type; ATP-PFK; PFK-L; 6-phosphofructokinase type B; Phosphofructo-1-kinase isozyme B; PFK-B; Phosphohexokinase; EC 2.7.1.11 from Homo sapiens (Human) (see 3 papers)
41% identity, 96% coverage: 6:319/328 of query aligns to 16:362/780 of P17858
- G81 (= G69) natural variant: G -> A
- R151 (vs. gap) to W: in dbSNP:rs755851304
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 2 modified: N-acetylalanine
- 527 T→A: Does not affect GlcNAcylation.
- 529 modified: carbohydrate, O-linked (GlcNAc) serine; S→A: Prevents GlcNAcylation and enhance enzyme activity.
P47859 ATP-dependent 6-phosphofructokinase, platelet type; ATP-PFK; PFK-P; 6-phosphofructokinase type C; Phosphofructo-1-kinase isozyme C; PFK-C; Phosphohexokinase; EC 2.7.1.11 from Oryctolagus cuniculus (Rabbit) (see paper)
41% identity, 96% coverage: 6:319/328 of query aligns to 25:371/791 of P47859
Sites not aligning to the query:
- 12 modified: Phosphoserine; by PKA
4xyjF Crystal structure of human phosphofructokinase-1 in complex with atp and mg, northeast structural genomics consortium target hr9275 (see paper)
43% identity, 87% coverage: 6:290/328 of query aligns to 11:325/761 of 4xyjF
- active site: G20 (= G15), R83 (= R76), C84 (≠ S77), D114 (≠ N107), G158 (= G129), S159 (≠ T130), D161 (= D132), D163 (= D134), R205 (= R176)
- binding adenosine-5'-triphosphate: G20 (= G15), Y50 (= Y45), R83 (= R76), C84 (≠ S77), F87 (= F80), R88 (≠ M81), G113 (= G106), D114 (≠ N107), G115 (= G108), S116 (= S109), G119 (= G112), S159 (≠ T130)
- binding magnesium ion: G19 (= G14), G20 (= G15), G112 (= G105), D114 (≠ N107), G158 (= G129), D163 (= D134), R205 (= R176)
- binding phosphate ion: R30 (= R25), R34 (= R29), S69 (≠ N62), S70 (≠ N63), G219 (= G190), K250 (= K218)
Sites not aligning to the query:
4xykA Crystal structure of human phosphofructokinase-1 in complex with adp, northeast structural genomics consortium target hr9275 (see paper)
43% identity, 87% coverage: 6:290/328 of query aligns to 9:323/737 of 4xykA
- active site: G18 (= G15), R81 (= R76), C82 (≠ S77), D112 (≠ N107), G156 (= G129), S157 (≠ T130), D159 (= D132), D161 (= D134), R203 (= R176)
- binding adenosine-5'-diphosphate: Y48 (= Y45), R81 (= R76), C82 (≠ S77), R86 (≠ M81), G111 (= G106), D112 (≠ N107), G113 (= G108), S114 (= S109)
- binding phosphate ion: R28 (= R25), R32 (= R29), S67 (≠ N62), K248 (= K218)
Sites not aligning to the query:
4xyjA Crystal structure of human phosphofructokinase-1 in complex with atp and mg, northeast structural genomics consortium target hr9275 (see paper)
43% identity, 87% coverage: 6:290/328 of query aligns to 13:327/768 of 4xyjA
- active site: G22 (= G15), R85 (= R76), C86 (≠ S77), D116 (≠ N107), G160 (= G129), S161 (≠ T130), D163 (= D132), D165 (= D134), R207 (= R176)
- binding adenosine-5'-triphosphate: G21 (= G14), G22 (= G15), Y52 (= Y45), C86 (≠ S77), F89 (= F80), R90 (≠ M81), G115 (= G106), D116 (≠ N107), G117 (= G108), S118 (= S109), G121 (= G112), S161 (≠ T130), R207 (= R176)
- binding magnesium ion: G21 (= G14), G22 (= G15), D116 (≠ N107), D165 (= D134)
- binding phosphate ion: R32 (= R25), R36 (= R29), S72 (≠ N63), G221 (= G190), K252 (= K218)
Sites not aligning to the query:
Query Sequence
>WP_035133638.1 NCBI__GCF_000769915.1:WP_035133638.1
MSSNIKKIGVLTSGGDSPGMNAAIRAVVRACAYHNIECTGIYRGYQGMIEGDFKEMGARS
VNNIINKGGTILKSARSKEFMTPEGRKKAHENLVSNNIDALVIIGGNGSFTGGLIFNEEY
NFPVIGIPGTIDNDIYGTSHTLGYDTALNTVVEAIDKIRDTASSHNRLFFVEVMGRDAGH
IALNAGIGAGAEEILIPEEDMGLDRLLDSLRKSKASGKSSSLVIVAEGDKIGKNVFELKD
YVEENMPEYDVRVSILGHMQRGGSPSCFDRVLASRLGVKAVETLLEGKSNFMVGLIKDEV
ELTPLDMAVKGKSHIDKELIKVSDIVSI
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory