SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_035240239.1 NCBI__GCF_000745975.1:WP_035240239.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
31% identity, 56% coverage: 34:164/232 of query aligns to 107:229/296 of P68183

query
sites
P68183
A
 
A
W
 
Y
L
 
A
L
 
F
A
 
A
R
 
R
K
 
M
N
 
R
F
 
F
W
 
P
G
 
G
K
 
K
-
 
A
T
 
T
L
 
L
V
 
L
D
 
K
G
 
G
L
 
M
I
 
-
H
 
-
L
 
L
P
 
I
L
 
F
V
 
Q
M
 
M
P
 
F
P
 
P
V
 
A
V
 
V
T
 
L
G
 
S
Y
 
L
M
 
V
L
 
A
L
 
L
L
 
-
V
 
-
M
 
-
G
 
-
K
 
-
Q
 
-
G
 
-
V
 
-
V
 
-
G
 
-
H
 
Y
W
 
A
L
 
L
F
 
F
E
 
D
H
 
R
T
 
L
G
 
G
L
 
E
C
 
Y
F
 
I
A
 
P
F
 
F
-
 
I
-
 
G
-
 
L
N
 
N
W
 
T
K
 
H
G
 
G
A
 
G
A
 
V
L
 
I
A
 
F
S
 
A
A
 
Y
I
 
L
M
 
G
A
 
G
F
 
I
P
 
A
L
 
L
L
 
H
V
 
V
R
 
W
A
 
T
I
 
I
R
 
K
L
 
G
S
 
Y
M
 
F
E
 
E
S
 
T
V
 
I
D
 
D
H
 
S
R
 
S
L
 
L
E
 
E
Q
x
E
A
 
A
A
|
A
Q
 
A
T
 
L
L
 
D
G
|
G
A
 
A
S
 
T
P
 
P
L
 
W
D
 
Q
Q
 
A
F
 
F
F
 
R
T
 
L
V
 
V
T
 
L
L
 
L
P
|
P
L
 
L
T
 
S
L
 
V
P
 
P
G
 
I
I
 
L
L
 
A
T
 
V
G
 
V
I
 
F
I
 
I
L
 
L
A
 
S
F
 
F
A
 
I
R
 
A
S
 
A
L
 
I
S
 
T
E
 
E

Query Sequence

>WP_035240239.1 NCBI__GCF_000745975.1:WP_035240239.1
MLNLTPIEIEALKLSLWVGFWAVTGSIGPGILVAWLLARKNFWGKTLVDGLIHLPLVMPP
VVTGYMLLLVMGKQGVVGHWLFEHTGLCFAFNWKGAALASAIMAFPLLVRAIRLSMESVD
HRLEQAAQTLGASPLDQFFTVTLPLTLPGILTGIILAFARSLSEFGATITFVSNIPGETR
TLPLALYTLTQMPDGEAGALRLCIICATVALAALVASEMMSRRLNRTLKGDH

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory