SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_036260774.1 NCBI__GCF_000746085.1:WP_036260774.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

A0A0H2ZQB9 Ergothioneine transporter EgtUBC from Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) (see paper)
35% identity, 43% coverage: 218:382/384 of query aligns to 59:207/506 of A0A0H2ZQB9

query
sites
A0A0H2ZQB9
G
 
G
V
 
I
L
 
F
Q
 
Q
T
 
T
I
 
I
P
 
P
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S
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L
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A
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L
F
 
L
G
 
G
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L
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F
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I
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-
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A
 
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P
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L
L
 
M
H
 
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D
 
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-
G
 
-
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-
G
 
-
G
 
G
T
 
I
G
 
G
A
 
T
A
 
L
P
 
P
A
 
A
I
 
L
I
 
T
A
 
A
L
 
L
T
 
V
L
 
I
Y
 
Y
A
 
A
L
 
I
L
 
F
P
 
P
L
 
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L
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Q
N
 
N
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T
Y
 
I
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T
G
 
G
F
 
L
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K
E
 
G
V
 
I
A
 
D
A
 
P
E
 
S
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L
K
 
Q
D
 
E
A
 
A
A
 
G
A
 
I
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A
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F
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G
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M
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T
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R
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W
Q
 
E
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R
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L
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K
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F
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E
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I
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P
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L
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A
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M
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P
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V
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I
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M
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S
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G
L
 
I
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R
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T
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A
T
 
A
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V
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L
S
 
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I
G
 
G
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T
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A
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T
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L
A
 
A
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T
L
 
L
I
 
I
G
 
G
A
 
A
G
 
G
G
 
G
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L
G
 
G
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S
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F
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I
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L
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L
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G
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I
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D
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R
Y
 
N
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N
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A
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S
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L
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I
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L
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I
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S
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N
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L
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L
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K
M
 
V
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M
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E
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K
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A
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K
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L
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R

Sites not aligning to the query:

B5Z7I3 Ergothioneine transport permease/ergothioneine binding protein EgtU from Helicobacter pylori (strain G27) (see paper)
35% identity, 54% coverage: 163:370/384 of query aligns to 42:233/553 of B5Z7I3

query
sites
B5Z7I3
L
 
L
A
 
I
K
 
K
E
 
E
F
 
F
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H
S
 
D
H
 
R
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F
A
 
I
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Y
F
 
F
F
 
I
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D
Q
 
L
L
 
L
W
 
A
R
 
Q
H
 
H
I
 
F
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I
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V
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A
G
 
L
A
 
S
L
 
G
F
 
F
F
 
L
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V
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L
M
 
V
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F
G
 
G
A
 
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L
L
 
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A
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A
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R
C
 
A
A
 
F
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L
F
 
L
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P
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Y
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I
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S
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A
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L
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F
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A
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L
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F
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I
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G
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G
A
 
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N
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A
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L
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L
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V
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L
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V
L
 
L
Y
 
Y
A
 
G
L
 
L
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L
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P
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I
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Y
N
 
S
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T
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Y
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N
G
 
A
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L
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K
E
 
E
V
 
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R
A
 
E
E
 
E
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V
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I
D
 
K
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A
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A
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I
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G
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L
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C
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K
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E
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H
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L
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A
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A
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V
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M
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A
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M
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A
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G
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I
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G
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A
L
 
L
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I
G
 
G
A
 
A
G
 
G
G
 
G
L
 
L
G
 
G
A
 
Q
F
 
A
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I
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F
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R
G
 
G
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L
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N
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T
Y
 
Q
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N
M
 
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D
 
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L
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L
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V
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A
G
 
G
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I
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I
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A
L
 
L
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F
A
 
S
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L
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A
D
 
D

Sites not aligning to the query:

Query Sequence

>WP_036260774.1 NCBI__GCF_000746085.1:WP_036260774.1
MPVVHNRVLLALCCAGALGVGFGGFLEVAPNRLARGLALPLWQAPFPEAAAIIIFLSLLA
LLAFMRQDKQRSIATVLAAAGVLWGSLAGAGHFAALLARADLPAARSSLGLAFWTLVAIA
FLAMVDAAQRAKPPLPLRIGFGLALGVGFVLMAQAGTFADLSLAKEFSSHRAIFFSQLWR
HIGLVAGALFFALMIGAPLTALALRRASMRCAIFSSLGVLQTIPSLALFGVLIAPLSALS
AQWPFLHDVGIGGTGAAPAIIALTLYALLPLVRNSYTGFTEVAAEVKDAAAGIGFNARQI
FVSVEFPLAAPALVSALRVVTVQSVGLAAVAALIGAGGLGAFVFQGIGQYVMDLVLVGAI
PIVLLALAADFSFQMLLAAARRRM

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory