Comparing WP_036263356.1 NCBI__GCF_000746085.1:WP_036263356.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P07821 Iron(3+)-hydroxamate import ATP-binding protein FhuC; Ferric hydroxamate uptake protein C; Ferrichrome transport ATP-binding protein FhuC; Iron(III)-hydroxamate import ATP-binding protein FhuC; EC 7.2.2.16 from Escherichia coli (strain K12) (see 2 papers)
35% identity, 82% coverage: 25:230/251 of query aligns to 27:241/265 of P07821
4zirA Crystal structure of ecfaa' heterodimer bound to amppnp (see paper)
32% identity, 76% coverage: 32:221/251 of query aligns to 30:219/263 of 4zirA
Sites not aligning to the query:
4hluA Structure of the ecfa-a' heterodimer bound to adp (see paper)
32% identity, 76% coverage: 32:221/251 of query aligns to 30:221/265 of 4hluA
Sites not aligning to the query:
5x40A Structure of a cbio dimer bound with amppcp (see paper)
34% identity, 78% coverage: 32:226/251 of query aligns to 28:229/280 of 5x40A
Sites not aligning to the query:
P0A9U3 Probable ATP-binding protein YbiT from Escherichia coli (strain K12) (see paper)
30% identity, 83% coverage: 9:216/251 of query aligns to 319:513/530 of P0A9U3
Sites not aligning to the query:
P0A9U4 Probable ATP-binding protein YbiT from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (see paper)
30% identity, 83% coverage: 9:216/251 of query aligns to 319:513/530 of P0A9U4
Sites not aligning to the query:
Q5M243 Energy-coupling factor transporter ATP-binding protein EcfA1; ECF transporter A component EcfA1; EC 7.-.-.- from Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) (see paper)
29% identity, 88% coverage: 10:231/251 of query aligns to 2:225/276 of Q5M243
8bwoA Cryo-em structure of nanodisc-reconstituted human mrp4 with e1202q mutation (outward-facing occluded conformation) (see paper)
34% identity, 92% coverage: 10:240/251 of query aligns to 393:618/1211 of 8bwoA
Sites not aligning to the query:
O15439 ATP-binding cassette sub-family C member 4; MRP/cMOAT-related ABC transporter; Multi-specific organic anion transporter B; MOAT-B; Multidrug resistance-associated protein 4; EC 7.6.2.-; EC 7.6.2.2; EC 7.6.2.3 from Homo sapiens (Human) (see 5 papers)
36% identity, 77% coverage: 10:202/251 of query aligns to 410:598/1325 of O15439
Sites not aligning to the query:
8bwrA Cryo-em structure of nanodisc-reconstituted wildtype human mrp4 (in complex with prostaglandin e2) (see paper)
36% identity, 77% coverage: 10:202/251 of query aligns to 396:584/1195 of 8bwrA
Sites not aligning to the query:
8bwqA Cryo-em structure of nanodisc-reconstituted wildtype human mrp4 (in complex with topotecan) (see paper)
36% identity, 77% coverage: 10:202/251 of query aligns to 396:584/1195 of 8bwqA
Sites not aligning to the query:
8bwpA Cryo-em structure of nanodisc-reconstituted wildtype human mrp4 (in complex with methotrexate) (see paper)
36% identity, 77% coverage: 10:202/251 of query aligns to 396:584/1195 of 8bwpA
Sites not aligning to the query:
8bjfA Cryo-em structure of nanodisc-reconstituted wildtype human mrp4 (inward-facing conformation) (see paper)
36% identity, 77% coverage: 10:202/251 of query aligns to 396:584/1195 of 8bjfA
Sites not aligning to the query:
8xokA Cryo-em structure of human abcc4 (see paper)
36% identity, 77% coverage: 10:202/251 of query aligns to 405:593/1206 of 8xokA
Sites not aligning to the query:
8j3wA Cryo-em structure of aspirin-bound abcc4
36% identity, 77% coverage: 10:202/251 of query aligns to 402:590/1218 of 8j3wA
Sites not aligning to the query:
8i4cA Cryo-em structure of u46619-bound abcc4
36% identity, 77% coverage: 10:202/251 of query aligns to 402:590/1218 of 8i4cA
Sites not aligning to the query:
8i4aA Cryo-em structure of dipyridamole-bound abcc4
36% identity, 77% coverage: 10:202/251 of query aligns to 402:590/1218 of 8i4aA
Sites not aligning to the query:
8iz7A Cryo-em structure of sulindac-bound hmrp4
36% identity, 77% coverage: 10:202/251 of query aligns to 401:589/1229 of 8iz7A
Sites not aligning to the query:
8iz9A Cryo-em structure of pge1-bound hmrp4
35% identity, 78% coverage: 7:202/251 of query aligns to 390:581/1224 of 8iz9A
Sites not aligning to the query:
8xomA Cryo-em structure of human abcc4 in complex with anp-bound in nbd1 and methotrexate (see paper)
36% identity, 77% coverage: 10:202/251 of query aligns to 404:592/1197 of 8xomA
Sites not aligning to the query:
>WP_036263356.1 NCBI__GCF_000746085.1:WP_036263356.1
MIDGAEAPAIRFRDLTLGYDRHPAVHHLDGDVESGALLAICGPNGAGKSTLLKGIAGALS
PFSGAVVLPRAKRREIAYLPQAADIDKSFPINVFDVVAMGLWKRCGLFGGISRKELDKVR
DAIAAVGLDGFEDRAIGTLSGGQLQRMLFARLLIQDAAIILLDEPFTAIDSKTSKDLLSL
IARWRAEKRTVLAVLHDLDLVRDYFPQTLLLAREKIAWGKTDAVLTPENLLQARAMIEAF
DRQAHNCARAA
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory