SitesBLAST
Comparing WP_038208762.1 NCBI__GCF_000745855.1:WP_038208762.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
4g09A The crystal structure of the c366s mutant of hdh from brucella suis in complex with a substituted benzyl ketone (see paper)
48% identity, 94% coverage: 17:453/463 of query aligns to 11:422/432 of 4g09A
- active site: Q253 (= Q284), H256 (= H287), E321 (= E352), H322 (= H353), D355 (= D386), H414 (= H445)
- binding (3S)-3-amino-1-[4-(benzyloxy)phenyl]-4-(1H-imidazol-4-yl)butan-2-one: P126 (= P141), A130 (= A145), Y132 (= Y147), S134 (= S149), H256 (= H287), E321 (= E352), H322 (= H353), D355 (= D386), Y356 (= Y387), H362 (= H393)
- binding zinc ion: H256 (= H287), D307 (= D338), D310 (≠ E341), D355 (= D386)
P10370 Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
39% identity, 91% coverage: 34:453/463 of query aligns to 31:427/434 of P10370
- H99 (= H105) mutation to N: Slight decrease in activity.
- C117 (≠ L126) mutation C->A,S: Almost no change in activity.
- C154 (≠ V163) mutation C->A,S: Almost no change in activity.
- H262 (= H287) mutation to N: 7000-fold decrease in activity.
- H327 (= H353) mutation to N: 500-fold decrease in activity.
- H367 (= H393) mutation to N: Slight decrease in activity.
- H419 (= H445) mutation to Q: 20-fold decrease in activity.
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
1karA L-histidinol dehydrogenase (hisd) structure complexed with histamine (inhibitor), zinc and NAD (cofactor) (see paper)
39% identity, 91% coverage: 34:453/463 of query aligns to 28:424/431 of 1karA
- active site: Q256 (= Q284), H259 (= H287), E323 (= E352), H324 (= H353), D357 (= D386), H416 (= H445)
- binding histamine: S137 (= S149), H259 (= H287), D357 (= D386), Y358 (= Y387), H364 (= H393)
- binding zinc ion: H259 (= H287), D357 (= D386)
1kahA L-histidinol dehydrogenase (hisd) structure complexed with l-histidine (product), zn and NAD (cofactor) (see paper)
39% identity, 91% coverage: 34:453/463 of query aligns to 28:424/431 of 1kahA
- active site: Q256 (= Q284), H259 (= H287), E323 (= E352), H324 (= H353), D357 (= D386), H416 (= H445)
- binding histidine: L135 (≠ Y147), H259 (= H287), H324 (= H353), D357 (= D386), Y358 (= Y387), H364 (= H393), E411 (= E440), L413 (= L442), H416 (= H445)
- binding zinc ion: H259 (= H287), D357 (= D386)
1kaeA L-histidinol dehydrogenase (hisd) structure complexed with l- histidinol (substrate), zinc and NAD (cofactor) (see paper)
39% identity, 91% coverage: 34:453/463 of query aligns to 31:427/434 of 1kaeA
- active site: Q259 (= Q284), H262 (= H287), E326 (= E352), H327 (= H353), D360 (= D386), H419 (= H445)
- binding L-histidinol: H262 (= H287), H327 (= H353), D360 (= D386), Y361 (= Y387), H367 (= H393)
- binding nicotinamide-adenine-dinucleotide: F58 (= F61), Y130 (= Y139), P132 (= P141), P162 (= P171), G186 (= G214), P209 (= P237), G210 (= G238), N211 (= N239), F213 (≠ Y241), H262 (= H287)
- binding zinc ion: Q259 (= Q284), H262 (= H287), D360 (= D386)
P06988 Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Escherichia coli (strain K12) (see 2 papers)
39% identity, 91% coverage: 34:453/463 of query aligns to 31:427/434 of P06988
- Y130 (= Y139) binding NAD(+)
- Q188 (= Q216) binding NAD(+)
- N211 (= N239) binding NAD(+)
- Q259 (= Q284) binding Zn(2+)
- H262 (= H287) binding Zn(2+)
- D360 (= D386) binding Zn(2+)
- H419 (= H445) binding Zn(2+)
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
5vldF Crystal structure of medicago truncatula l-histidinol dehydrogenase in complex with l-histidine and NAD+ (see paper)
39% identity, 90% coverage: 39:453/463 of query aligns to 33:427/435 of 5vldF
- active site: Q258 (= Q284), H261 (= H287), E326 (= E352), H327 (= H353), D360 (= D386), H419 (= H445)
- binding histidine: S135 (= S149), S236 (= S262), Q258 (= Q284), H261 (= H287), E326 (= E352), H327 (= H353), D360 (= D386), Y361 (= Y387), H367 (= H393), E414 (= E440), H419 (= H445)
- binding nicotinamide-adenine-dinucleotide: F55 (= F61), D56 (= D62), Y125 (= Y139), P127 (= P141), G129 (= G143), T130 (≠ K144), Q187 (= Q216), P208 (= P237), G209 (= G238), N210 (= N239), Y212 (= Y241), A233 (= A259), G234 (= G260), S236 (= S262), H261 (= H287), E326 (= E352), H367 (= H393), V368 (= V394), L369 (= L395)
- binding zinc ion: Q258 (= Q284), H261 (= H287), D360 (= D386)
5vlbA Crystal structure of medicago truncatula l-histidinol dehydrogenase in complex with imidazole (see paper)
39% identity, 90% coverage: 39:453/463 of query aligns to 32:426/434 of 5vlbA
5vlcA Crystal structure of medicago truncatula l-histidinol dehydrogenase in complex with l-histidinol (see paper)
39% identity, 90% coverage: 39:453/463 of query aligns to 30:424/431 of 5vlcA
- active site: Q255 (= Q284), H258 (= H287), E323 (= E352), H324 (= H353), D357 (= D386), H416 (= H445)
- binding L-histidinol: H258 (= H287), E323 (= E352), H324 (= H353), D357 (= D386), Y358 (= Y387), H364 (= H393), E411 (= E440), H416 (= H445)
- binding zinc ion: Q255 (= Q284), H258 (= H287), D357 (= D386)
6an0A Crystal structure of histidinol dehydrogenase from elizabethkingia anophelis
34% identity, 90% coverage: 35:453/463 of query aligns to 31:428/433 of 6an0A
- active site: Q260 (= Q284), H263 (= H287), E327 (= E352), H328 (= H353), D361 (= D386), H420 (= H445)
- binding histidine: E103 (≠ K110), N104 (≠ A111), K105 (≠ S112), R118 (≠ Q128), E119 (≠ K129), A120 (≠ V130), K390 (≠ R415)
- binding zinc ion: H263 (= H287), D361 (= D386)
9cp8A Crystal structure of dhps-3-dehydrogenase, hpsn from cupriavidus pinatubonensis in complex with product (r-sulfolactate) and nadh (see paper)
35% identity, 92% coverage: 31:455/463 of query aligns to 14:421/436 of 9cp8A
- binding (2r)-3-sulfolactic acid: H126 (≠ Y147), S226 (= S262), H251 (= H287), E318 (= E352), H319 (= H353), D352 (= D386), K353 (≠ Y387), H359 (= H393)
- binding 1,4-dihydronicotinamide adenine dinucleotide: L45 (≠ F61), D46 (= D62), Y118 (= Y139), P120 (= P141), A121 (≠ G142), G122 (= G143), G177 (= G213), G178 (= G214), P201 (= P237), G202 (= G238), N203 (= N239), F205 (≠ Y241), A223 (= A259), G224 (= G260), S226 (= S262), H251 (= H287), E318 (= E352), H359 (= H393), V360 (= V394), L361 (= L395)
- binding zinc ion: Q248 (= Q284), H251 (= H287), D352 (= D386)
9cp7A Crystal structure of dhps-3-dehydrogenase, hpsn from cupriavidus pinatubonensis in complex with product analogue (l-cysteate) and nadh (see paper)
35% identity, 92% coverage: 31:455/463 of query aligns to 14:421/436 of 9cp7A
- binding 1,4-dihydronicotinamide adenine dinucleotide: L45 (≠ F61), D46 (= D62), Y118 (= Y139), P120 (= P141), A121 (≠ G142), G122 (= G143), G177 (= G213), G178 (= G214), P201 (= P237), G202 (= G238), N203 (= N239), F205 (≠ Y241), A223 (= A259), G224 (= G260), S226 (= S262), H251 (= H287), E318 (= E352), H359 (= H393), L361 (= L395)
- binding cysteinesulfonic acid: H126 (≠ Y147), S226 (= S262), H251 (= H287), E318 (= E352), H319 (= H353), D352 (= D386), K353 (≠ Y387), H359 (= H393), M408 (≠ L442), H411 (= H445)
- binding zinc ion: Q248 (= Q284), H251 (= H287), D352 (= D386)
9cp9A Sulfopropanediol 3-dehydrogenase (see paper)
35% identity, 92% coverage: 31:455/463 of query aligns to 13:420/435 of 9cp9A
- binding (2R)-2,3-dihydroxypropane-1-sulfonic acid: H125 (≠ Y147), S225 (= S262), H250 (= H287), E317 (= E352), D351 (= D386), K352 (≠ Y387), H358 (= H393)
- binding 1,4-dihydronicotinamide adenine dinucleotide: D45 (= D62), Y117 (= Y139), P119 (= P141), A120 (≠ G142), G121 (= G143), G176 (= G213), G177 (= G214), P200 (= P237), G201 (= G238), N202 (= N239), F204 (≠ Y241), A222 (= A259), G223 (= G260), S225 (= S262), H250 (= H287), E317 (= E352), H358 (= H393), V359 (= V394), L360 (= L395)
- binding zinc ion: Q247 (= Q284), H250 (= H287), D351 (= D386)
8v37A Crystal structure of hpsn d352a mutant from cupriavidus pinatubonensis in complex with NAD+ (see paper)
33% identity, 91% coverage: 33:455/463 of query aligns to 15:413/428 of 8v37A
8v36B Crystal structure of dhps-3-dehydrogenase, hpsn from cupriavidus pinatubonensis in complex with nadh (see paper)
31% identity, 91% coverage: 34:455/463 of query aligns to 7:387/402 of 8v36B
- binding 1,4-dihydronicotinamide adenine dinucleotide: L34 (≠ F61), D35 (= D62), Y107 (= Y139), G166 (= G213), G167 (= G214), Q169 (= Q216), P190 (= P237), G191 (= G238), N192 (= N239), F194 (≠ Y241)
- binding zinc ion: H115 (≠ Y147), Q227 (= Q284), H230 (= H287)
8v37B Crystal structure of hpsn d352a mutant from cupriavidus pinatubonensis in complex with NAD+ (see paper)
31% identity, 91% coverage: 36:455/463 of query aligns to 12:390/405 of 8v37B
Query Sequence
>WP_038208762.1 NCBI__GCF_000745855.1:WP_038208762.1
MSLKAAPARLSTASASFEADFKARLHWSADTDAAIEQRVADILADVQRRGDAAVLEYTRR
FDGLAAGSMAQLELTQADFRAAFESLPAAQRDALRSAAERVRSYHEAQKKASGESWTYRD
ADGTLLGQKVTPLDRVGIYVPGGKAAYPSSLLMNAIPAHVAGVQEIIMVVPTPAKGSVAT
GGSGTEPAAQGERNVLVLAAAHVAGVTRAFTIGGAQAVAALAYGTATVPAVDKITGPGNA
YVAAAKRRVFGTVGIDMIAGPSEILVLADGSTPPDWVAMDLFSQAEHDELAQSILLSPDA
AYIDAVQREIDRLLPDMPRAQIIAASLTGRGALIHTRDMEEACAISNRIAPEHLEVSSRE
PHRWEPLLRHAGAIFLGAFTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIE
VSEQGAQALGPIAAELAYGEGLQAHARAAEMRLARSGEERPAS
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory