SitesBLAST
Comparing WP_041099674.1 NCBI__GCF_000828635.1:WP_041099674.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8rpgA Crystal structure of an alcohol oxidase from streptomyces hiroshimensis (see paper)
36% identity, 98% coverage: 10:538/541 of query aligns to 3:517/518 of 8rpgA
- binding flavin-adenine dinucleotide: G9 (= G16), G11 (= G18), S12 (≠ T19), A13 (= A20), E33 (= E40), A34 (= A41), W59 (= W67), P77 (≠ A85), R78 (= R86), G79 (= G87), G84 (= G92), S85 (≠ C93), N89 (= N97), F90 (≠ G98), M92 (≠ L100), Q216 (≠ L224), V217 (≠ I225), A247 (= A259), F453 (= F474), A488 (= A509), H498 (≠ N519), T499 (= T520), H500 (≠ N521), A503 (≠ T524)
5nccA Structure of fatty acid photodecarboxylase in complex with fad and palmitic acid (see paper)
35% identity, 97% coverage: 9:535/541 of query aligns to 23:569/578 of 5nccA
- active site: R347 (≠ K325), L420 (≠ V388), I421 (≠ C389), S507 (≠ I473), A509 (≠ H475), G552 (= G518), Q553 (≠ N519)
- binding flavin-adenine dinucleotide: G30 (= G16), G32 (= G18), T33 (= T19), A34 (= A20), L53 (= L39), E54 (= E40), A55 (= A41), F74 (≠ I60), W80 (= W67), A98 (= A85), G100 (= G87), G105 (= G92), S106 (≠ C93), N110 (= N97), A111 (≠ G98), T112 (≠ M99), L113 (= L100), V238 (≠ I225), A278 (= A259), H282 (≠ G263), L286 (≠ I267), N508 (≠ F474), Q553 (≠ N519), T554 (= T520), G555 (≠ N521), V558 (≠ T524)
8b7sA Crystal structure of the chloramphenicol-inactivating oxidoreductase from novosphingobium sp (see paper)
33% identity, 99% coverage: 9:541/541 of query aligns to 4:456/458 of 8b7sA
- binding flavin-adenine dinucleotide: G11 (= G16), G13 (= G18), S14 (≠ T19), A15 (= A20), E35 (= E40), A36 (= A41), W47 (= W67), P65 (≠ A85), G67 (= G87), V180 (≠ I225), A214 (= A259), G215 (= G260), A218 (≠ G263), T270 (≠ M342), Y391 (≠ F474), A424 (= A509), I435 (≠ T520), N436 (= N521)
A0A248QE08 Fatty acid photodecarboxylase, chloroplastic; CvFAP; EC 4.1.1.106 from Chlorella variabilis (Green alga) (see paper)
35% identity, 97% coverage: 9:535/541 of query aligns to 83:636/654 of A0A248QE08
- TA 93:94 (= TA 19:20) binding FAD
- E114 (= E40) binding FAD
- L162 (≠ V89) binding FAD
- S166 (≠ C93) binding FAD
- NATL 170:173 (≠ NGML 97:100) binding FAD
- V298 (≠ I225) binding FAD
- C432 (≠ S345) binding hexadecanoate
- R451 (≠ H365) binding hexadecanoate
- Y466 (vs. gap) binding hexadecanoate
- Q486 (≠ S387) binding hexadecanoate
- G622 (≠ N521) binding FAD
6yrvAAA structure of fap after illumination at 100k (see paper)
35% identity, 97% coverage: 9:535/541 of query aligns to 7:560/573 of 6yrvAAA
- binding carbon dioxide: R375 (≠ H365), N499 (≠ F474)
- binding flavin-adenine dinucleotide: G14 (= G16), G16 (= G18), T17 (= T19), A18 (= A20), L37 (= L39), E38 (= E40), A39 (= A41), F58 (≠ I60), W64 (= W67), A82 (= A85), G89 (= G92), S90 (≠ C93), N94 (= N97), A95 (≠ G98), T96 (≠ M99), L97 (= L100), M191 (≠ N194), V222 (≠ I225), C264 (≠ T258), A265 (= A259), G266 (= G260), H269 (≠ G263), N499 (≠ F474), A534 (= A509), Q544 (≠ N519), T545 (= T520), G546 (≠ N521)
- binding heptadecane: V377 (≠ Q367), G379 (vs. gap), M380 (vs. gap), G386 (vs. gap), T389 (vs. gap), Y390 (vs. gap), F393 (≠ L371), T408 (= T385), Q410 (≠ S387)
8rpfA Crystal structure of an alcohol-oxidase from sphingobacterium daejeonense (see paper)
32% identity, 97% coverage: 9:535/541 of query aligns to 2:530/534 of 8rpfA
- binding 1-butanol: S62 (≠ K70), R218 (≠ D226), N401 (= N405), Y403 (≠ A407), A405 (= A409), P406 (= P410), L407 (≠ V411)
- binding flavin-adenine dinucleotide: G9 (= G16), G11 (= G18), T12 (= T19), E33 (= E40), A34 (= A41), W59 (= W67), P77 (≠ A85), G79 (= G87), G84 (= G92), S85 (≠ C93), N89 (= N97), V92 (≠ L100), V217 (≠ I225), A251 (= A259), N255 (≠ G263), F468 (= F474), A504 (= A509), H514 (≠ N519), T515 (= T520), M516 (≠ N521), V519 (≠ T524)
5oc1A Crystal structure of aryl-alcohol oxidase from pleurotus eryngii in complex with p-anisic acid (see paper)
34% identity, 98% coverage: 9:537/541 of query aligns to 1:563/565 of 5oc1A
- active site: V339 (≠ K325), N413 (= N390), A414 (vs. gap), I499 (= I473), H501 (= H475), A544 (≠ G518), H545 (≠ N519)
- binding 4-methoxybenzoic acid: Y91 (≠ G98), I356 (vs. gap), I390 (≠ L369), F396 (≠ G375), T412 (≠ C389), I499 (= I473), H501 (= H475), H545 (≠ N519)
- binding flavin-adenine dinucleotide: G8 (= G16), G10 (= G18), N11 (≠ T19), A12 (= A20), E32 (= E40), A33 (= A41), W60 (= W67), P78 (≠ A85), G80 (= G87), G85 (= G92), S86 (≠ C93), H90 (≠ N97), Y91 (≠ G98), V93 (≠ L100), V230 (≠ I225), S270 (≠ T258), A271 (= A259), G272 (= G260), F500 (= F474), H545 (≠ N519), T546 (= T520), Q547 (≠ N521), I550 (≠ T524)
3fimB Crystal structure of aryl-alcohol-oxidase from pleurotus eryingii (see paper)
33% identity, 98% coverage: 9:537/541 of query aligns to 1:563/565 of 3fimB
- active site: V339 (≠ K325), N413 (= N390), A414 (vs. gap), I499 (= I473), H501 (= H475), A544 (≠ G518), H545 (≠ N519)
- binding flavin-adenine dinucleotide: G8 (= G16), N11 (≠ T19), A12 (= A20), E32 (= E40), A33 (= A41), W60 (= W67), P78 (≠ A85), G80 (= G87), G85 (= G92), S86 (≠ C93), H90 (≠ N97), Y91 (≠ G98), V93 (≠ L100), V230 (≠ I225), S270 (≠ T258), A271 (= A259), F500 (= F474), H501 (= H475), H545 (≠ N519), T546 (= T520), Q547 (≠ N521), I550 (≠ T524)
E4QP00 5-(hydroxymethyl)furfural oxidase; 5-hydroxymethylfurfural oxidase; HMFO; Thiol oxidase; EC 1.1.3.47; EC 1.8.3.- from Methylovorus sp. (strain MP688) (see paper)
36% identity, 97% coverage: 10:535/541 of query aligns to 6:527/531 of E4QP00
- V101 (≠ I96) mutation to H: Abolishes activity.
- M103 (≠ G98) mutation to A: 16-fold reduction in catalytic efficiency on vanillyl alcohol.
- V367 (≠ T385) mutation to K: 1.6-fold reduction in catalytic efficiency on vanillyl alcohol. Shows significantly improved activity on the aldehyde 5-formyl-2-furancarboxylate, which results in a better 5-hydroxymethylfurfural to 2,5-furandicarboxylate conversion.; mutation to R: 1.4-fold reduction in catalytic efficiency on vanillyl alcohol. Shows significantly improved activity on the aldehyde 5-formyl-2-furancarboxylate, which results in a better 5-hydroxymethylfurfural to 2,5-furandicarboxylate conversion. Displays a catalytic efficiency toward 5-formyl-2-furancarboxylate that is over 1000-fold higher than that for wild-type; when associated with F-466.
- W369 (≠ S387) mutation to A: 7.5-fold reduction in catalytic efficiency on vanillyl alcohol.
- V465 (≠ I473) mutation to A: 18-fold reduction in catalytic efficiency on vanillyl alcohol.
- W466 (≠ F474) mutation to A: 39-fold reduction in catalytic efficiency on vanillyl alcohol. In contrast to wild-type, is active on secondary alcohols, such as (S)-1-phenylethanol, and is strictly enantionselective as this mutant has no activity on (R)-1-phenylethanol. Shows increased activity on the aldehyde 5-formyl-2-furancarboxylate.; mutation to F: 3.4-fold reduction in catalytic efficiency on vanillyl alcohol. In contrast to wild-type, is active on secondary alcohols, such as (S)-1-phenylethanol, and is strictly enantionselective as this mutant has no activity on (R)-1-phenylethanol. Shows increased activity on the aldehyde 5-formyl-2-furancarboxylate. Displays a catalytic efficiency toward 5-formyl-2-furancarboxylate that is over 1000-fold higher than that for wild-type; when associated with R-367.
- H467 (= H475) mutation to A: Abolishes activity.
- N511 (= N519) mutation to A: 53-fold reduction in catalytic efficiency on vanillyl alcohol.
4udqA Crystal structure of 5-hydroxymethylfurfural oxidase (hmfo) in the reduced state
36% identity, 97% coverage: 10:535/541 of query aligns to 2:523/525 of 4udqA
- active site: L331 (= L347), F364 (≠ A386), W365 (≠ S387), V461 (≠ I473), H463 (= H475), A506 (≠ G518), N507 (= N519)
- binding flavin-adenine dinucleotide: G8 (= G16), G10 (= G18), T11 (= T19), A12 (= A20), E32 (= E40), A33 (= A41), W64 (= W67), G88 (= G87), G93 (= G92), G94 (≠ C93), N98 (= N97), M99 (≠ G98), V101 (≠ L100), V229 (≠ I225), T261 (= T258), A262 (= A259), W462 (≠ F474), H463 (= H475), A497 (= A509), N507 (= N519), T508 (= T520), N509 (= N521), T512 (= T524)
4mjwA Crystal structure of choline oxidase in complex with the reaction product glycine betaine (see paper)
34% identity, 98% coverage: 9:539/541 of query aligns to 13:530/532 of 4mjwA
- active site: I333 (≠ Y332), P377 (≠ A386), N378 (≠ S387), V464 (≠ I473), H466 (= H475), V509 (≠ G518), N510 (= N519)
- binding flavin-adenine dinucleotide: G20 (= G16), G22 (= G18), S23 (≠ T19), E44 (= E40), A45 (= A41), W71 (= W67), R89 (= R86), A90 (≠ G87), G95 (= G92), C96 (= C93), H99 (≠ I96), N100 (= N97), S101 (≠ G98), I103 (≠ L100), R231 (≠ L224), A232 (≠ I225), T269 (≠ A259), G270 (= G260), D273 (≠ G263), Y465 (≠ F474), H466 (= H475), A500 (= A509), N510 (= N519), P511 (≠ T520), N512 (= N521), V515 (≠ T524)
3ljpA Crystal structure of choline oxidase v464a mutant (see paper)
34% identity, 98% coverage: 9:539/541 of query aligns to 13:530/530 of 3ljpA
- active site: I333 (≠ Y332), P377 (≠ A386), N378 (≠ S387), A464 (≠ I473), H466 (= H475), V509 (≠ G518), N510 (= N519)
- binding dihydroflavine-adenine dinucleotide: G22 (= G18), S23 (≠ T19), E44 (= E40), A45 (= A41), W71 (= W67), R89 (= R86), A90 (≠ G87), G95 (= G92), C96 (= C93), H99 (≠ I96), N100 (= N97), S101 (≠ G98), I103 (≠ L100), A232 (≠ I225), T269 (≠ A259), D273 (≠ G263), Y465 (≠ F474), H466 (= H475), D499 (= D508), A500 (= A509), N510 (= N519), P511 (≠ T520), N512 (= N521), V515 (≠ T524)
2jbvA Crystal structure of choline oxidase reveals insights into the catalytic mechanism (see paper)
33% identity, 97% coverage: 9:535/541 of query aligns to 13:526/527 of 2jbvA
- active site: I333 (≠ Y332), P377 (≠ A386), N378 (≠ S387), V464 (≠ I473), H466 (= H475), V509 (≠ G518), N510 (= N519)
- binding [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S)-5-[(4aS,10aR)-7,8-dimethyl-2,4-dioxo-1,3,4,4a,5,10a-hexahydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate: G22 (= G18), S23 (≠ T19), E44 (= E40), A45 (= A41), W71 (= W67), A90 (≠ G87), G95 (= G92), C96 (= C93), H99 (≠ I96), N100 (= N97), S101 (≠ G98), I103 (≠ L100), R231 (≠ L224), A232 (≠ I225), T269 (≠ A259), G270 (= G260), D273 (≠ G263), V464 (≠ I473), Y465 (≠ F474), H466 (= H475), D499 (= D508), A500 (= A509), N510 (= N519), P511 (≠ T520), N512 (= N521), V515 (≠ T524)
4ha6A Crystal structure of pyridoxine 4-oxidase - pyridoxamine complex (see paper)
34% identity, 97% coverage: 11:536/541 of query aligns to 3:505/508 of 4ha6A
- active site: F360 (≠ V388), G361 (≠ C389), H444 (≠ I473), H446 (= H475), G487 (= G518), P488 (≠ N519)
- binding flavin-adenine dinucleotide: G8 (= G16), G10 (= G18), S11 (≠ T19), A12 (= A20), E32 (= E40), A33 (= A41), W58 (= W67), R77 (= R86), G78 (= G87), G83 (= G92), S84 (≠ C93), L87 (≠ I96), H88 (≠ N97), A89 (≠ G98), M90 (= M99), G91 (≠ L100), V218 (≠ I225), A251 (= A259), G252 (= G260), E255 (≠ G263), H445 (≠ F474), A478 (= A509), P488 (≠ N519), I489 (≠ T520), H490 (≠ N521)
- binding 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol: A89 (≠ G98), S314 (= S321), H444 (≠ I473), H446 (= H475)
3t37A Crystal structure of pyridoxine 4-oxidase from mesorbium loti
34% identity, 97% coverage: 11:536/541 of query aligns to 3:505/509 of 3t37A
- active site: F360 (≠ V388), G361 (≠ C389), H444 (≠ I473), H446 (= H475), G487 (= G518), P488 (≠ N519)
- binding flavin-adenine dinucleotide: G8 (= G16), G10 (= G18), S11 (≠ T19), A12 (= A20), E32 (= E40), A33 (= A41), W58 (= W67), R77 (= R86), G78 (= G87), R79 (≠ K88), G83 (= G92), S84 (≠ C93), H88 (≠ N97), A89 (≠ G98), G91 (≠ L100), R217 (≠ L224), V218 (≠ I225), A251 (= A259), E255 (≠ G263), H445 (≠ F474), A478 (= A509), P488 (≠ N519), I489 (≠ T520), H490 (≠ N521)
9avhA Crystal structure of an aryl-alcohol-oxidase from bjerkandera adusta. (see paper)
32% identity, 97% coverage: 10:535/541 of query aligns to 14:572/578 of 9avhA
- binding 4-methoxybenzoic acid: F103 (≠ G98), H423 (≠ R392), I510 (= I473), H512 (= H475), H556 (≠ N519)
- binding flavin-adenine dinucleotide: G20 (= G16), G22 (= G18), N23 (≠ T19), A24 (= A20), E44 (= E40), A45 (= A41), G97 (= G92), S98 (≠ C93), N102 (= N97), F103 (≠ G98), E105 (≠ L100), T240 (≠ L224), V241 (≠ I225), A282 (= A259), W511 (≠ F474), H512 (= H475), G546 (≠ A509), H556 (≠ N519), P557 (≠ T520), M558 (≠ N521), I561 (≠ T524)
8bxlB Patulin synthase from penicillium expansum (see paper)
31% identity, 97% coverage: 10:535/541 of query aligns to 14:586/590 of 8bxlB
- binding flavin-adenine dinucleotide: G20 (= G16), G22 (= G18), T23 (= T19), A24 (= A20), E44 (= E40), A45 (= A41), W80 (= W67), G100 (= G87), G105 (= G92), S106 (≠ C93), R109 (≠ I96), N110 (= N97), Y111 (≠ G98), A113 (≠ L100), L253 (= L224), A254 (≠ I225), A288 (= A259), Q292 (≠ G263), F525 (= F474), D559 (= D508), A560 (= A509), H570 (≠ N519), P571 (≠ T520), Q572 (≠ N521), L575 (≠ T524)
7aa2A Chaetomium thermophilum fad-dependent oxidoreductase in complex with abts (see paper)
31% identity, 97% coverage: 9:535/541 of query aligns to 1:578/584 of 7aa2A
- binding 3-ethyl-2-[(2z)-2-(3-ethyl-6-sulfo-1,3-benzothiazol-2(3h)-ylidene)hydrazino]-6-sulfo-3h-1,3-benzothiazol-1-ium: W52 (= W67), A88 (≠ G98), V90 (≠ L100), L354 (vs. gap), Y431 (≠ C389), N517 (≠ I473), H519 (= H475), S562 (≠ N519)
- binding dihydroflavine-adenine dinucleotide: G8 (= G16), G10 (= G18), I11 (≠ T19), S12 (≠ A20), E32 (= E40), A33 (= A41), W56 (vs. gap), A77 (≠ G87), G82 (= G92), G83 (≠ C93), I86 (= I96), N87 (= N97), A88 (≠ G98), V90 (≠ L100), L227 (= L224), V228 (≠ I225), A265 (= A259), A518 (≠ F474), H519 (= H475), D551 (= D508), I552 (≠ A509), S562 (≠ N519), P563 (≠ T520), M564 (≠ N521)
6ze6A Fad-dependent oxidoreductase from chaetomium thermophilum in complex with fragment 4-nitrocatechol (see paper)
31% identity, 97% coverage: 9:535/541 of query aligns to 1:578/585 of 6ze6A
- binding 4-nitrocatechol: I75 (≠ A85), L92 (= L102), Q306 (≠ H300), V360 (vs. gap), Y431 (≠ C389), L433 (= L391), N514 (≠ G470), S516 (≠ T472), N517 (≠ I473), H519 (= H475), G561 (= G518), S562 (≠ N519)
- binding dihydroflavine-adenine dinucleotide: G8 (= G16), G10 (= G18), I11 (≠ T19), S12 (≠ A20), E32 (= E40), A33 (= A41), W56 (vs. gap), A77 (≠ G87), G82 (= G92), G83 (≠ C93), N87 (= N97), A88 (≠ G98), V90 (≠ L100), L227 (= L224), V228 (≠ I225), A265 (= A259), A518 (≠ F474), H519 (= H475), D551 (= D508), I552 (≠ A509), S562 (≠ N519), P563 (≠ T520), M564 (≠ N521)
6ze5A Fad-dependent oxidoreductase from chaetomium thermophilum in complex with fragment 2-(1h-indol-3-yl)-n-[(1-methyl-1h-pyrrol-2-yl) methyl]ethanamine (see paper)
31% identity, 97% coverage: 9:535/541 of query aligns to 1:578/585 of 6ze5A
- binding 2-(1H-indol-3-yl)-N-[(1-methyl-1H-pyrrol-2-yl)methyl]ethanamine: I75 (≠ A85), V90 (≠ L100), Y431 (≠ C389), N517 (≠ I473), D576 (≠ A533)
- binding dihydroflavine-adenine dinucleotide: G8 (= G16), G10 (= G18), I11 (≠ T19), S12 (≠ A20), E32 (= E40), A33 (= A41), W56 (vs. gap), A77 (≠ G87), G82 (= G92), G83 (≠ C93), N87 (= N97), A88 (≠ G98), V90 (≠ L100), L227 (= L224), V228 (≠ I225), A265 (= A259), A518 (≠ F474), H519 (= H475), D551 (= D508), I552 (≠ A509), S562 (≠ N519), P563 (≠ T520), M564 (≠ N521)
Sites not aligning to the query:
Query Sequence
>WP_041099674.1 NCBI__GCF_000828635.1:WP_041099674.1
MTQARDFGEFDYVIAGGGTAGCVLANRLSADPDVTVLLLEAGGKDDWIWIHIPIGYLKCI
NNPRTDWCYKTEAEPGLNGRSIIYARGKVLGGCSSINGMLYLRGQVRDYDEWAQVTGDSR
WNWDSVLPVFRQSEDYWGGADEMHGDKGEWRVEKQRLHWDILDRYTQAAQQAGIPFRQDY
NRGDNFGIGHFEVNQKKGVRWNASKAMLRPVLHRPNLKVVTGALIDKLILDGKEARGVEF
SLDGVPHRVAARIETLLTAGAIGSPTILQRSGIGPANLLHNRGVPLVHELPGVGGNLQDH
LQLRMIFKVHGITTLNQRAHSLWGKAMMGLEYALFRSGPLSMAPSQLGGFFHSSPEVATP
DLEFHVQPLSLEKFGDPLHSFPAFTASVCNLRPSSRGVVHIRDRNPATAPVIAPNYLSTE
NDRRVAARALRLTRNIVAQPAMAPYRPEEHQPGAQKQSDEELAKAAGDIGTTIFHPTCTC
AMGRADDVNAVVDPELRVRGIGRLRVIDASIMPTITSGNTNAPTVMIAERGAALIHAARK
T
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory