Comparing WP_041313637.1 NCBI__GCF_000019165.1:WP_041313637.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8cplC Yzw2 a scaffold for cryo-em of small proteins of interest
48% identity, 94% coverage: 4:390/413 of query aligns to 30:428/499 of 8cplC
4uoyA Crystal structure of ygjg in complex with pyridoxal-5'-phosphate (see paper)
48% identity, 94% coverage: 4:390/413 of query aligns to 32:430/454 of 4uoyA
4uoxA Crystal structure of ygjg in complex with pyridoxal-5'-phosphate and putrescine (see paper)
48% identity, 94% coverage: 4:390/413 of query aligns to 32:430/453 of 4uoxA
P42588 Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli (strain K12) (see paper)
48% identity, 94% coverage: 4:390/413 of query aligns to 38:436/459 of P42588
4ppmA Crystal structure of pige: a transaminase involved in the biosynthesis of 2-methyl-3-n-amyl-pyrrole (map) from serratia sp. Fs14 (see paper)
38% identity, 99% coverage: 4:410/413 of query aligns to 23:461/464 of 4ppmA
A0A0J9X1Q5 Aminotransferase PigE; EC 2.6.1.- from Serratia sp. (strain FS14) (see paper)
43% identity, 85% coverage: 4:355/413 of query aligns to 394:748/853 of A0A0J9X1Q5
A0QYS9 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
45% identity, 86% coverage: 30:385/413 of query aligns to 23:365/390 of A0QYS9
2ordA Crystal structure of acetylornithine aminotransferase (ec 2.6.1.11) (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution
38% identity, 92% coverage: 27:404/413 of query aligns to 20:391/393 of 2ordA
Q9X2A5 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
38% identity, 92% coverage: 27:404/413 of query aligns to 12:383/385 of Q9X2A5
8ht4B Crystal structure of acetylornithine aminotransferase complex with plp from corynebacterium glutamicum (see paper)
40% identity, 91% coverage: 30:403/413 of query aligns to 22:389/390 of 8ht4B
Q5SHH5 [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
41% identity, 91% coverage: 30:403/413 of query aligns to 32:394/395 of Q5SHH5
1wkhA Acetylornithine aminotransferase from thermus thermophilus hb8
41% identity, 91% coverage: 30:403/413 of query aligns to 24:386/387 of 1wkhA
Sites not aligning to the query:
1wkgA Acetylornithine aminotransferase from thermus thermophilus hb8
41% identity, 91% coverage: 30:403/413 of query aligns to 24:386/387 of 1wkgA
Sites not aligning to the query:
1vefA Acetylornithine aminotransferase from thermus thermophilus hb8
41% identity, 91% coverage: 30:403/413 of query aligns to 24:386/387 of 1vefA
Sites not aligning to the query:
2eh6A Crystal structure of acetylornithine aminotransferase from aquifex aeolicus vf5
38% identity, 91% coverage: 30:403/413 of query aligns to 15:375/375 of 2eh6A
O66442 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Aquifex aeolicus (strain VF5)
38% identity, 91% coverage: 30:403/413 of query aligns to 16:376/376 of O66442
7nncC Crystal structure of mycobacterium tuberculosis argd with prosthetic group pyridoxal-5'-phosphate and 6-methoxyquinoline-3-carboxylic acid
43% identity, 91% coverage: 33:406/413 of query aligns to 28:390/391 of 7nncC
7nn4A Crystal structure of mycobacterium tuberculosis argd with prosthetic group pyridoxal 5'-phosphate and 3-hydroxy-2-naphthoic acid.
43% identity, 91% coverage: 33:406/413 of query aligns to 28:390/391 of 7nn4A
Sites not aligning to the query:
P9WPZ7 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
43% identity, 91% coverage: 33:406/413 of query aligns to 34:396/400 of P9WPZ7
Sites not aligning to the query:
Q6LFH8 Ornithine aminotransferase; PfOAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Plasmodium falciparum (isolate 3D7) (see paper)
36% identity, 91% coverage: 31:404/413 of query aligns to 34:408/414 of Q6LFH8
>WP_041313637.1 NCBI__GCF_000019165.1:WP_041313637.1
MATVMEAYENHINPAVARLFRLMGMGSTAVRAEGCFVYDEQGREYIDFLGNFGVLSLGHR
HPRIIASILEQLNGLAQTSRFLLDKATASLAEALAGITPGDLQYCFFCNSGAEAVEAAIK
IARLATGKSGFIATINGFHGKTFGALSVSGREPFRAPFLPLLPRVIHVPFGDAAALEEVM
ARDRHIAAFIVEPVQGEGGVIVPPRGYLKEVEALCRQAGVLLIADEVQTGLGRTGSLFAC
DEEGLVPDLLCLAKALGGGVMPIGAVVGRPALWAPLFDHPWLHTSTFGGNPLACAAALAA
IEVTIEEDLMGQARQKGDWLLSRLKELASRHEQVIADVRGRGLLIGIELTKEGVGGFVIG
RMMEERIIVGYTLNHPRVIRLEPPLNVPWEVLMQVYAVLEQVIQEAEAFVHDL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory