Comparing WP_041670877.1 NCBI__GCF_000015985.1:WP_041670877.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
61% identity, 99% coverage: 1:240/242 of query aligns to 2:240/241 of 4u00A
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
57% identity, 99% coverage: 1:240/242 of query aligns to 1:240/240 of 4ymuJ
3c4jA Abc protein artp in complex with atp-gamma-s
54% identity, 99% coverage: 1:240/242 of query aligns to 3:242/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
54% identity, 99% coverage: 1:240/242 of query aligns to 3:242/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
54% identity, 99% coverage: 1:240/242 of query aligns to 3:242/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
54% identity, 99% coverage: 1:240/242 of query aligns to 3:242/242 of 2oljA
P02915 Histidine/lysine/arginine/ornithine transport ATP-binding protein HisP; EC 7.4.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
50% identity, 96% coverage: 9:241/242 of query aligns to 14:258/258 of P02915
1b0uA Atp-binding subunit of the histidine permease from salmonella typhimurium (see paper)
50% identity, 96% coverage: 9:241/242 of query aligns to 10:254/258 of 1b0uA
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
37% identity, 99% coverage: 1:240/242 of query aligns to 1:245/343 of P30750
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
36% identity, 99% coverage: 1:240/242 of query aligns to 2:246/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
36% identity, 99% coverage: 1:240/242 of query aligns to 2:246/344 of 3tuiC
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
36% identity, 99% coverage: 1:240/242 of query aligns to 2:246/344 of 6cvlD
7ahhC Opua inhibited inward-facing, sbd docked (see paper)
38% identity, 96% coverage: 5:237/242 of query aligns to 30:264/382 of 7ahhC
Sites not aligning to the query:
7aheC Opua inhibited inward facing (see paper)
38% identity, 96% coverage: 5:237/242 of query aligns to 30:264/382 of 7aheC
Sites not aligning to the query:
7ahdC Opua (e190q) occluded (see paper)
39% identity, 92% coverage: 5:227/242 of query aligns to 30:254/260 of 7ahdC
Sites not aligning to the query:
3d31A Modbc from methanosarcina acetivorans (see paper)
36% identity, 98% coverage: 1:236/242 of query aligns to 1:228/348 of 3d31A
Sites not aligning to the query:
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
35% identity, 99% coverage: 1:239/242 of query aligns to 17:251/378 of P69874
Sites not aligning to the query:
P19566 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
38% identity, 97% coverage: 2:236/242 of query aligns to 4:234/369 of P19566
Sites not aligning to the query:
2awnB Crystal structure of the adp-mg-bound e. Coli malk (crystallized with atp-mg) (see paper)
37% identity, 97% coverage: 2:236/242 of query aligns to 3:233/374 of 2awnB