Comparing WP_041677064.1 NCBI__GCF_000230695.2:WP_041677064.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4yerA Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
40% identity, 69% coverage: 5:217/307 of query aligns to 9:223/285 of 4yerA
8ee6A Cryo-em structure of human abca7 in pe/ch nanodiscs (see paper)
33% identity, 95% coverage: 4:294/307 of query aligns to 1501:1803/1808 of 8ee6A
Sites not aligning to the query:
7e7oA Cryo-em structure of human abca4 in nrpe-bound state (see paper)
36% identity, 65% coverage: 14:214/307 of query aligns to 823:1023/2003 of 7e7oA
Sites not aligning to the query:
Q9BZC7 ATP-binding cassette sub-family A member 2; ATP-binding cassette transporter 2; ATP-binding cassette 2; EC 7.6.2.- from Homo sapiens (Human) (see paper)
35% identity, 66% coverage: 12:214/307 of query aligns to 1003:1205/2435 of Q9BZC7
Sites not aligning to the query:
7lkpA Structure of atp-free human abca4 (see paper)
35% identity, 66% coverage: 13:214/307 of query aligns to 746:947/1941 of 7lkpA
Sites not aligning to the query:
7e7qA Cryo-em structure of human abca4 in atp-bound state (see paper)
31% identity, 92% coverage: 15:297/307 of query aligns to 808:1091/1958 of 7e7qA
Sites not aligning to the query:
8eopA Cryo-em structure of nanodisc reconstituted human abca7 eq mutant in atp bound closed state (see paper)
35% identity, 73% coverage: 4:227/307 of query aligns to 1455:1681/1687 of 8eopA
Sites not aligning to the query:
8f5bA Human abca4 structure in complex with amp-pnp (see paper)
36% identity, 65% coverage: 15:214/307 of query aligns to 737:936/1924 of 8f5bA
Sites not aligning to the query:
P78363 Retinal-specific phospholipid-transporting ATPase ABCA4; ATP-binding cassette sub-family A member 4; RIM ABC transporter; RIM proteinv; RmP; Retinal-specific ATP-binding cassette transporter; Stargardt disease protein; EC 7.6.2.1 from Homo sapiens (Human) (see 43 papers)
36% identity, 65% coverage: 15:214/307 of query aligns to 945:1144/2273 of P78363