Comparing WP_042446385.1 NCBI__GCF_002893965.1:WP_042446385.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
Q9FMF7 Dicarboxylate transporter 2.1, chloroplastic; AtpDCT1; Glutamate/malate translocator from Arabidopsis thaliana (Mouse-ear cress) (see paper)
44% identity, 94% coverage: 29:491/493 of query aligns to 95:561/563 of Q9FMF7
6okzB Structure of vcindy bound to fumarate
25% identity, 78% coverage: 99:483/493 of query aligns to 70:439/444 of 6okzB
7t9gA Structure of vcindy-na+ (see paper)
25% identity, 78% coverage: 99:483/493 of query aligns to 71:440/445 of 7t9gA
6wtxA Structure of vcindy in complex with terephthalate (see paper)
25% identity, 78% coverage: 99:483/493 of query aligns to 71:440/445 of 6wtxA
>WP_042446385.1 NCBI__GCF_002893965.1:WP_042446385.1
MSEAKSESTESFSETTPPAEPSKQSVLRRYYPAAVPVVLGLIIYFMPVPDGVDPKGMHML
GIFVGTIVALILQPLPTGSVALVGLSIAMITQTETPTEALSGFSNTTIWLIVASFFIAEG
FLVTGLGKRVALMFVTKLGKSSLGLSYGMALTDLILAPATPSNTARAGGVVYPIIVSLSK
LEDSNPEPEDSRKKLGAYLLLTSLQVNVVTSAMFITAMAGNPVAVDAAAKIGIDISWGKW
ALAASVPGIASLIAIPWVMSKIFPPTMLKTPKAPEQAREELRKAGPISRNEKIMAATFVL
LLVLWCLGSQLNVNATTTAFVGIGILLVTKVLTWNNLVHDTGAWQTLVFFAVLVGMASHL
EELGVISWIGTQVSSSVDGLPWIWAFAILTLVYFYAHYLFASNTAQIVAMYAVFLGAAVA
TGAPPLFSALVFGFIGSLFGGISHYASGPAGVIYGSGYIKTSEWFRIGFVMSVVIILIWT
IIGGAWMKLIGAW
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory