Comparing WP_043460616.1 NCBI__GCF_000430725.1:WP_043460616.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
6u7lA 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. (see paper)
37% identity, 97% coverage: 5:500/511 of query aligns to 7:448/460 of 6u7lA
>WP_043460616.1 NCBI__GCF_000430725.1:WP_043460616.1
MEPVIRIHPADDVVIARQQLVSGTRIAGLGFTVQGLVPPGHKVAVRDIAAGQPVRRYNQV
IGNATRDIAAGQHVHVHNLAFSDFERALEVGVDARPTAYVTPPATFEGIVRADGRVATRN
YIGILSSVNCSATVARAIADHFKGHPRLPADAQPLAAFPNVDGVVALTHGLGCATDSEGE
ALKLLRRTLGGYARHPNFAALLVIGLGCETNQIAGLMAQEGLEASTKLHVFNIQDSGGTA
QSVAHGVALVESLLPEANRARRQPVPASHLTVGLQCGGSDGYSGISANPALGAAVDRLVT
HGGSAILSETPEIYGGEHLLTRRAVSPEVAGRLIERVRWWERYTARNDMQMDNNPSAGNK
AGGLTTILEKSLGAIAKSGTTALVDVLEYAQPATARGLLYMDTPGYDPVSATGQVAGGAN
LICFTTGRGSAYGCAPAPSLKFSTNTALWNRQRDDIDLNCGGIVDGEATVDEVGEAIFRQ
MLATASGQKTKSEGHGYGQHEFVPWSLGAVM
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory