Comparing WP_043742980.1 NCBI__GCF_000009985.1:WP_043742980.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3jtxB Crystal structure of aminotransferase (np_283882.1) from neisseria meningitidis z2491 at 1.91 a resolution
42% identity, 98% coverage: 7:396/399 of query aligns to 1:391/393 of 3jtxB
2o1bA Structure of aminotransferase from staphylococcus aureus
26% identity, 84% coverage: 63:396/399 of query aligns to 52:371/376 of 2o1bA
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
25% identity, 92% coverage: 33:399/399 of query aligns to 38:384/384 of 1o4sB
2x5dD Crystal structure of a probable aminotransferase from pseudomonas aeruginosa (see paper)
27% identity, 88% coverage: 33:382/399 of query aligns to 18:360/380 of 2x5dD
6l1oB Product bound bacf structure from bacillus subtillis (see paper)
25% identity, 97% coverage: 11:396/399 of query aligns to 9:387/392 of 6l1oB
6l1lB Apo-bacf structure from bacillus subtillis (see paper)
25% identity, 97% coverage: 11:396/399 of query aligns to 9:387/393 of 6l1lB
6l1nA Substrate bound bacf structure from bacillus subtillis (see paper)
26% identity, 88% coverage: 46:396/399 of query aligns to 46:386/393 of 6l1nA
Sites not aligning to the query:
5wmhA Arabidopsis thaliana prephenate aminotransferase (see paper)
27% identity, 80% coverage: 37:357/399 of query aligns to 34:365/399 of 5wmhA
5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v (see paper)
27% identity, 80% coverage: 37:357/399 of query aligns to 34:365/402 of 5wmiA
Sites not aligning to the query:
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
24% identity, 93% coverage: 28:397/399 of query aligns to 21:382/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
24% identity, 93% coverage: 28:397/399 of query aligns to 21:382/388 of 1gd9A
5wmlA Arabidopsis thaliana prephenate aminotransferase mutant- k306a (see paper)
27% identity, 80% coverage: 37:357/399 of query aligns to 35:366/404 of 5wmlA
Sites not aligning to the query:
1v2fA Crystal structure of t.Th hb8 glutamine aminotransferase complex with 3-phenylpropionate (see paper)
26% identity, 94% coverage: 24:397/399 of query aligns to 17:368/368 of 1v2fA
Sites not aligning to the query:
1v2eA Crystal structure of t.Th hb8 glutamine aminotransferase complex with a-keto-g-methylthiobutyrate (see paper)
26% identity, 94% coverage: 24:397/399 of query aligns to 17:368/368 of 1v2eA
Sites not aligning to the query:
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
27% identity, 92% coverage: 33:398/399 of query aligns to 32:383/385 of Q56232
Sites not aligning to the query:
1bkgA Aspartate aminotransferase from thermus thermophilus with maleate (see paper)
28% identity, 83% coverage: 33:362/399 of query aligns to 32:356/382 of 1bkgA
1bjwA Aspartate aminotransferase from thermus thermophilus (see paper)
28% identity, 83% coverage: 33:362/399 of query aligns to 32:356/382 of 1bjwA
Sites not aligning to the query:
1b5oA Thermus thermophilus aspartate aminotransferase single mutant 1 (see paper)
28% identity, 83% coverage: 33:362/399 of query aligns to 32:356/382 of 1b5oA
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
28% identity, 83% coverage: 33:362/399 of query aligns to 32:356/382 of 1gc4A
Sites not aligning to the query:
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
28% identity, 83% coverage: 33:362/399 of query aligns to 32:356/382 of 1gc3A
Sites not aligning to the query:
>WP_043742980.1 NCBI__GCF_000009985.1:WP_043742980.1
MIIAPALDARLDGLPDYPFARLAKLLGAPARPDSTVMSIGEPQHRPPALVAEVLAANTSS
WGKYPPANGPAELRQAVADWAGRRYDLPQGLIDPEKAILPVAGTREALYLIAQTVCGDRE
GQRPLVLMPNPFYQVYAGAAVMAGAEPVFVPGANGPASQPDFSTLPADLLDRTALAYVCS
PANPQGSVADAALLERQVRTARDHGFVLAVDECYSEIWDKVPPPGVLKTCAALGEGLANV
LMFNSLSKRSSVPGLRSGVVVGDERVIHAFARLRSYGGAATPLPIAAAAAALWRDEAHVT
ESNDLYRAKLDVAERVLGGRFGFYRPPGGFFLWLDVGDGEAAAVKLWQEGNIRVLPGAYL
AAEDSEEGNPGSRFIRVALVHDLAGTEAALTRLASILGG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory