SitesBLAST
Comparing WP_043878852.1 NCBI__GCF_000010525.1:WP_043878852.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q9A3Q9 Omega-aminotransferase; Beta-alanine--pyruvate aminotransferase; EC 2.6.1.-; EC 2.6.1.18 from Caulobacter vibrioides (strain ATCC 19089 / CB15) (Caulobacter crescentus) (see paper)
55% identity, 96% coverage: 15:445/449 of query aligns to 8:435/439 of Q9A3Q9
- V227 (= V237) mutation to G: Decreases activity toward 3-aminobutanoate by 2-fold. Increases activity toward the aromatic beta-amino acid 3-amino-3-phenylpropanoate by 2-fold.
- R260 (= R270) mutation to L: Decreases activity toward 3-aminobutanoate by 30-fold.
- N285 (= N295) mutation to A: Decreases activity toward 3-aminobutanoate by 4-fold. Increases activity toward the aromatic beta-amino acid 3-amino-3-phenylpropanoate by 3-fold.
Q9I700 Beta-alanine--pyruvate aminotransferase; Beta-A--Py AT; Beta-alanine--pyruvate transaminase; Omega-amino acid aminotransferase; Omega-amino acid AT; Omega-amino acid--pyruvate aminotransferase; Omega-APT; EC 2.6.1.18 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
49% identity, 95% coverage: 10:437/449 of query aligns to 11:436/448 of Q9I700
- W61 (= W62) binding substrate
- T327 (= T328) binding pyridoxal 5'-phosphate
- R414 (= R415) binding substrate
- Q421 (≠ A422) binding substrate
4b98A The structure of the omega aminotransferase from pseudomonas aeruginosa (see paper)
49% identity, 95% coverage: 10:437/449 of query aligns to 4:429/441 of 4b98A
- active site: F17 (= F23), Y146 (= Y154), E219 (= E229), D252 (= D262), I255 (= I265), K281 (= K291), Q414 (≠ A422)
- binding pyridoxal-5'-phosphate: G233 (= G243), Q236 (≠ E246), F270 (≠ L280), G271 (= G281)
- binding 3-[o-phosphonopyridoxyl]--amino-benzoic acid: L53 (= L61), W54 (= W62), F82 (= F90), S112 (= S120), G113 (= G121), S114 (= S122), Y146 (= Y154), H147 (= H155), G148 (= G156), E219 (= E229), S224 (= S234), D252 (= D262), V254 (= V264), I255 (= I265), K281 (= K291), Y319 (= Y327), T320 (= T328), R407 (= R415), Q414 (≠ A422)
4uhmA Characterization of a novel transaminase from pseudomonas sp. Strain aac (see paper)
49% identity, 95% coverage: 13:437/449 of query aligns to 1:423/435 of 4uhmA
- active site: F11 (= F23), Y140 (= Y154), E213 (= E229), D246 (= D262), I249 (= I265), K275 (= K291), Q408 (≠ A422)
- binding magnesium ion: A91 (= A105), D99 (≠ N113)
- binding pyridoxal-5'-phosphate: G107 (= G121), S108 (= S122), Y140 (= Y154), H141 (= H155), G142 (= G156), E213 (= E229), D246 (= D262), V248 (= V264), I249 (= I265), K275 (= K291)
3a8uX Crystal structure of omega-amino acid:pyruvate aminotransferase
49% identity, 97% coverage: 9:445/449 of query aligns to 2:441/441 of 3a8uX
- active site: Y145 (= Y154), D252 (= D262), K281 (= K291), Q414 (≠ A422)
- binding pyridoxal-5'-phosphate: S111 (= S120), G112 (= G121), S113 (= S122), Y145 (= Y154), H146 (= H155), G147 (= G156), E219 (= E229), D252 (= D262), V254 (= V264), I255 (= I265), K281 (= K291)
5lhaA Amine transaminase crystal structure from an uncultivated pseudomonas species in the pmp-bound form
39% identity, 94% coverage: 19:441/449 of query aligns to 10:439/447 of 5lhaA
- active site: Y146 (= Y154), D253 (= D262), K282 (= K291), T319 (= T328)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G113 (= G121), S114 (= S122), Y146 (= Y154), H147 (= H155), G148 (= G156), E220 (= E229), D253 (= D262), K282 (= K291), Y318 (= Y327), T319 (= T328)
5lh9D Amine transaminase crystal structure from an uncultivated pseudomonas species in the plp-bound (internal aldimine) form
39% identity, 94% coverage: 19:441/449 of query aligns to 12:441/449 of 5lh9D
- active site: Y148 (= Y154), D255 (= D262), K284 (= K291), T321 (= T328)
- binding pyridoxal-5'-phosphate: G115 (= G121), S116 (= S122), Y148 (= Y154), H149 (= H155), G150 (= G156), E222 (= E229), D255 (= D262), V257 (= V264), K284 (= K291)
6gwiB The crystal structure of halomonas elongata amino-transferase (see paper)
34% identity, 100% coverage: 3:449/449 of query aligns to 2:446/450 of 6gwiB
- active site: F18 (≠ Y19), Y149 (= Y154), D255 (= D262), K284 (= K291)
- binding pyridoxal-5'-phosphate: S115 (= S120), G116 (= G121), S117 (= S122), Y149 (= Y154), H150 (= H155), G151 (= G156), E222 (= E229), D255 (= D262), V257 (= V264), I258 (= I265), K284 (= K291)
3i5tA Crystal structure of aminotransferase prk07036 from rhodobacter sphaeroides kd131
37% identity, 92% coverage: 37:449/449 of query aligns to 27:438/444 of 3i5tA
- active site: Y144 (= Y154), E216 (= E229), D249 (= D262), V252 (≠ I265), K279 (= K291), V411 (≠ A422)
- binding pyridoxal-5'-phosphate: G111 (= G121), S112 (= S122), Y144 (= Y154), H145 (= H155), E216 (= E229), D249 (= D262), V251 (= V264), K279 (= K291), Y315 (= Y327), T316 (= T328)
Sites not aligning to the query:
7qx3A Structure of the transaminase tr2e2 with eos (see paper)
33% identity, 92% coverage: 36:447/449 of query aligns to 2:416/422 of 7qx3A
6s54A Transaminase from pseudomonas fluorescens (see paper)
36% identity, 92% coverage: 30:443/449 of query aligns to 24:446/453 of 6s54A