SitesBLAST
Comparing WP_045581573.1 NCBI__GCF_001305595.1:WP_045581573.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q5SKN9 Long-chain-fatty-acid--CoA ligase; Long-chain fatty acyl-CoA synthetase; LC-FACS; EC 6.2.1.3 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
39% identity, 93% coverage: 33:545/549 of query aligns to 23:533/541 of Q5SKN9
- T184 (= T199) binding Mg(2+)
- G302 (= G314) binding tetradecanoyl-AMP
- Q322 (≠ H334) binding tetradecanoyl-AMP
- G323 (≠ V335) binding tetradecanoyl-AMP
- T327 (= T339) binding tetradecanoyl-AMP
- E328 (= E340) binding Mg(2+)
- D418 (= D431) binding tetradecanoyl-AMP
- K435 (= K448) binding tetradecanoyl-AMP
- K439 (≠ I452) binding tetradecanoyl-AMP
1v26B Crystal structure of tt0168 from thermus thermophilus hb8 (see paper)
40% identity, 84% coverage: 33:492/549 of query aligns to 16:463/510 of 1v26B
- active site: T177 (= T199), H197 (≠ N219), H223 (= H243), T320 (= T339), E321 (= E340), K432 (≠ I452), W437 (≠ N457)
- binding adenosine monophosphate: G295 (= G314), S296 (≠ A315), A297 (= A316), G316 (≠ V335), Y317 (= Y336), G318 (= G337), L319 (= L338), T320 (= T339), D411 (= D431), K428 (= K448), K432 (≠ I452), W437 (≠ N457)
- binding magnesium ion: T177 (= T199), E321 (= E340)
1v25A Crystal structure of tt0168 from thermus thermophilus hb8 (see paper)
40% identity, 84% coverage: 33:494/549 of query aligns to 16:464/491 of 1v25A
- active site: T177 (= T199), H197 (≠ N219), H223 (= H243), T320 (= T339), E321 (= E340), K432 (≠ I452), W437 (≠ N457)
- binding phosphoaminophosphonic acid-adenylate ester: H223 (= H243), V224 (≠ C244), G295 (= G314), S296 (≠ A315), A297 (= A316), Y317 (= Y336), G318 (= G337), L319 (= L338), T320 (= T339), D411 (= D431), I423 (= I443), K432 (≠ I452), W437 (≠ N457)
- binding magnesium ion: T177 (= T199), E321 (= E340)
8i3iA Acyl-acp synthetase structure bound to amp-pnp in the presence of mgcl2
32% identity, 91% coverage: 47:544/549 of query aligns to 28:519/522 of 8i3iA
- binding phosphoaminophosphonic acid-adenylate ester: T172 (= T199), G174 (= G201), T175 (= T202), T176 (= T203), K180 (= K207), G293 (= G314), A294 (= A315), A295 (= A316), Y315 (= Y336), M317 (≠ L338), S318 (≠ T339), D408 (= D431), R423 (= R446)
8i6mA Acyl-acp synthetase structure bound to amp-c18:1
31% identity, 91% coverage: 47:544/549 of query aligns to 26:525/528 of 8i6mA
- binding adenosine monophosphate: G291 (= G314), A293 (= A316), G312 (≠ V335), Y313 (= Y336), G314 (= G337), M315 (≠ L338), S316 (≠ T339), D406 (= D431), R421 (= R446)
- binding magnesium ion: M315 (≠ L338), S316 (≠ T339), E317 (= E340)
8i51A Acyl-acp synthetase structure bound to amp-mc7
31% identity, 91% coverage: 47:544/549 of query aligns to 26:525/528 of 8i51A
- binding adenosine monophosphate: G291 (= G314), A293 (= A316), Y313 (= Y336), M315 (≠ L338), S316 (≠ T339), D406 (= D431), R421 (= R446)
- binding 7-methoxy-7-oxidanylidene-heptanoic acid: W225 (= W247), G290 (≠ A313), G312 (≠ V335), G314 (= G337), M315 (≠ L338), P320 (= P344), I321 (vs. gap)
8i8eA Acyl-acp synthetase structure bound to c18:1-acp
31% identity, 91% coverage: 47:544/549 of query aligns to 28:527/530 of 8i8eA
- binding adenosine monophosphate: G292 (≠ A313), G293 (= G314), A294 (= A315), A295 (= A316), G314 (≠ V335), Y315 (= Y336), M317 (≠ L338), S318 (≠ T339), D408 (= D431), R423 (= R446)
- binding 4'-phosphopantetheine: R93 (= R111), P220 (= P240), H223 (= H243)
8i49A Acyl-acp synthetase structure bound to atp
31% identity, 91% coverage: 47:544/549 of query aligns to 28:527/530 of 8i49A
8i22A Acyl-acp synthetase structure bound to pimelic acid monoethyl ester
31% identity, 91% coverage: 47:544/549 of query aligns to 28:527/530 of 8i22A
8i8dA Acyl-acp synthetase structure bound to mc7-acp
31% identity, 91% coverage: 47:544/549 of query aligns to 28:527/529 of 8i8dA