Comparing WP_046010355.1 NCBI__GCF_000967895.1:WP_046010355.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P07821 Iron(3+)-hydroxamate import ATP-binding protein FhuC; Ferric hydroxamate uptake protein C; Ferrichrome transport ATP-binding protein FhuC; Iron(III)-hydroxamate import ATP-binding protein FhuC; EC 7.2.2.16 from Escherichia coli (strain K12) (see 2 papers)
34% identity, 94% coverage: 1:240/255 of query aligns to 12:248/265 of P07821
4fi3C Structure of vitamin b12 transporter btucd-f in a nucleotide-bound state (see paper)
34% identity, 93% coverage: 16:253/255 of query aligns to 15:245/248 of 4fi3C
Sites not aligning to the query:
1l7vC Bacterial abc transporter involved in b12 uptake (see paper)
35% identity, 88% coverage: 16:239/255 of query aligns to 15:231/231 of 1l7vC
5x40A Structure of a cbio dimer bound with amppcp (see paper)
32% identity, 86% coverage: 12:230/255 of query aligns to 17:230/280 of 5x40A
Sites not aligning to the query:
O65934 ABC transporter ATP-binding/permease protein Rv1747; EC 7.-.-.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 3 papers)
35% identity, 80% coverage: 13:216/255 of query aligns to 332:528/865 of O65934
Sites not aligning to the query:
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
25% identity, 88% coverage: 13:237/255 of query aligns to 15:233/240 of 6mjpA
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
27% identity, 93% coverage: 2:237/255 of query aligns to 2:233/233 of 6b8bA
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
27% identity, 93% coverage: 2:237/255 of query aligns to 2:233/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
27% identity, 93% coverage: 2:237/255 of query aligns to 2:233/238 of 6s8gA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
27% identity, 93% coverage: 2:237/255 of query aligns to 2:233/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
27% identity, 93% coverage: 2:237/255 of query aligns to 2:233/234 of 4p31A
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
27% identity, 93% coverage: 2:237/255 of query aligns to 2:233/235 of 6mhzA
6mbnA Lptb e163q in complex with atp (see paper)
26% identity, 93% coverage: 2:237/255 of query aligns to 3:234/241 of 6mbnA
4hluC Structure of the ecfa-a' heterodimer bound to adp (see paper)
30% identity, 78% coverage: 1:200/255 of query aligns to 5:193/249 of 4hluC
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
29% identity, 85% coverage: 14:231/255 of query aligns to 15:227/240 of 4ymuJ
Sites not aligning to the query:
4zirB Crystal structure of ecfaa' heterodimer bound to amppnp (see paper)
29% identity, 78% coverage: 1:200/255 of query aligns to 4:189/247 of 4zirB
5lilA Structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p21) (see paper)
26% identity, 88% coverage: 15:238/255 of query aligns to 22:240/615 of 5lilA
Sites not aligning to the query:
5lj7A Structure of aggregatibacter actinomycetemcomitans macb bound to atp (p21) (see paper)
26% identity, 88% coverage: 15:238/255 of query aligns to 22:240/592 of 5lj7A
H2LNR5 Iron-sulfur clusters transporter ABCB7, mitochondrial; ATP-binding cassette sub-family B member 7, mitochondrial from Oryzias latipes (Japanese rice fish) (Japanese killifish) (see paper)
31% identity, 83% coverage: 12:223/255 of query aligns to 477:682/746 of H2LNR5
Sites not aligning to the query:
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
30% identity, 84% coverage: 15:229/255 of query aligns to 17:225/241 of 4u00A
Sites not aligning to the query:
>WP_046010355.1 NCBI__GCF_000967895.1:WP_046010355.1
MSLNQLNLSRHGKKILQDISGEFAGGKIIALLGPNGAGKSTLIQAMARLLKCDGNIELQG
HNIATYSSEQLAQKLAYLPQHSQLQFPLEVEEVLSLATLPFSLSKLQQRQQVKQVISDWE
IEPLAHKDFRQLSGGEQQRCQIARTYLQLSNMQTEGRGCGLWLLDEPSSSLDLQHQQQLQ
TVCRQAAEDGHCVVIVLHDLNQAIRLADEVWLLKQGKLVAQGSAKEVMTEALIKQVFNVS
ARRIDDAGDHFFVFS
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory