SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing WP_047006968.1 NCBI__GCF_001010925.1:WP_047006968.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 11 hits to proteins with known functional sites (download)

P13804 Electron transfer flavoprotein subunit alpha, mitochondrial; Alpha-ETF from Homo sapiens (Human) (see 6 papers)
57% identity, 100% coverage: 1:311/311 of query aligns to 20:330/333 of P13804

query
sites
P13804

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20:204 (vs. 1:184, 44% identical) Domain I
G116 (= G96) to R: in GA2A; impaired protein stability and loss of electron transfer activity; dbSNP:rs119458971
T171 (= T151) to I: decreased protein stability; dbSNP:rs1801591
R223 (= R203) binding FAD
S248 (= S229) binding FAD
R249 (= R230) mutation to A: Loss of electron transfer activity.
VGQT 263:266 (= VGQT 244:247) binding FAD
T266 (= T247) to M: in GA2A; decreased electron transfer activity; dbSNP:rs119458970
SGAIQH 281:286 (= SGAIQH 262:267) binding FAD
N300 (= N281) binding FAD
DL 318:319 (= DL 299:300) binding FAD

Sites not aligning to the query:

205:333 Domain II

2a1uA Crystal structure of the human etf e165betaa mutant (see paper)
57% identity, 100% coverage: 1:311/311 of query aligns to 2:312/315 of 2a1uA

query
sites
2a1uA

M

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binding flavin-adenine dinucleotide: G204 (= G202), R205 (= R203), S230 (= S229), R231 (= R230), A232 (= A231), Q244 (= Q243), V245 (= V244), G246 (= G245), T248 (= T247), G261 (= G260), I262 (= I261), S263 (= S262), A265 (= A264), Q267 (= Q266), H268 (= H267), N282 (= N281), K283 (= K282), D300 (= D299), L301 (= L300)

1efpA Electron transfer flavoprotein (etf) from paracoccus denitrificans (see paper)
66% identity, 83% coverage: 55:311/311 of query aligns to 53:307/307 of 1efpA

query
sites
1efpA

V

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D

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L

binding flavin-adenine dinucleotide: G199 (= G202), R200 (= R203), G201 (≠ A204), S225 (= S229), R226 (= R230), A227 (= A231), Q239 (= Q243), V240 (= V244), G241 (= G245), T243 (= T247), G256 (= G260), I257 (= I261), S258 (= S262), A260 (= A264), Q262 (= Q266), H263 (= H267), N277 (= N281), K278 (= K282), D295 (= D299), L296 (= L300)

6fahE Molecular basis of the flavin-based electron-bifurcating caffeyl-coa reductase reaction (see paper)
39% identity, 72% coverage: 88:311/311 of query aligns to 157:388/393 of 6fahE

query
sites
6fahE

V

V

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L

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D

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A

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D

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A

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G
|
G

I
|
I

S
|
S

G

G

A

A

I

I

Q
|
Q

H
|
H

L

I

A

A

G

G

M

M

K

Q

D

D

S

S

K

D

V

I

I

I

V

I

A

A

I

I

N
|
N

K
|
K

D

N

P

E

D

N

A

A

P

P

I

I

F

F

Q

E

V

V

A

A

D

D

I

Y

G

G

L

I

V

V

A

G

D

D

L
|
L

F

Y

N

K

A

V

V

I

P

P

E

A

L

I

T

I

E

E

K

E

L

L

binding flavin-adenine dinucleotide: L180 (≠ Q111), R200 (= R126), M281 (≠ R203), G282 (≠ A204), R307 (= R230), A308 (= A231), Q320 (= Q243), V321 (= V244), G322 (= G245), Q323 (= Q246), T324 (= T247), G337 (= G260), I338 (= I261), S339 (= S262), Q343 (= Q266), H344 (= H267), N358 (= N281), K359 (= K282), L377 (= L300)

Sites not aligning to the query:

binding iron/sulfur cluster: 7, 10, 13, 17, 18, 35, 36, 37, 38, 41, 45, 49

4kpuA Electron transferring flavoprotein of acidaminococcus fermentans: towards a mechanism of flavin-based electron bifurcation (see paper)
34% identity, 86% coverage: 45:311/311 of query aligns to 55:332/338 of 4kpuA

query
sites
4kpuA

A

A

G

K

D

D

A

V

A

P

A

S

K

K

I

L

-

I

-

A

A

R

G

G

V

A

E

D

K

L

V

V

L

Y

V

V

A

C

S

Q

D

D

A

P

A

A

Y

F

A

K

N

Y

G

Y

L

S

A

T

E

D

N

E

V

Y

A

T

P

N

L

A

I

F

V

C

G

E

L

M

M

I

D

D

G

E

Y

Y

D

Q

-

P

-

S

A

S

V

V

L

F

A

I

P

G

A

A

T

T

T

N

T

D

G

G

K

R

N

D

I

L

L

G

P

P

R

R

V

I

A

A

K

R

L

V

D

N

V

T

M

G

Q
x
L

V

C

S

A

D

D

I

C

I

T

A

I

V

L

E

D

-

A

-

E

-

D

G

G

P

L

K

I

T

E

F

W

K

T

R
|
R

P

P

I

A

Y

A

A

G

G

G

N

N

A

I

I

M

A

A

T

T

V
x
I

E

L

S

C

G

K

D

E

A

H

K

R

L

P

V

Q

I

M

-

G

T

T

V

V

R

R

A

P

T

K

S

T

F

F

D

K

K

A

A

M

E

E

-

P

-

D

-

A

A

S

T

R

G

T

G

G

S

E

A

V

S

I

V

N

E

Y

T

T

V

L

S

K

G

N

A

H

G

V

D

D

A

D

G

R

L

V

S

T

S

C

F

I

V

R

S

R

L

E

D

E

A

V

V

V

E

S

S

E

E

G

R

E

P

M

E

A

L

I

T

D

S

D

A

A

G

P

I

F

V

V

V

C

S

S

G

G

G
|
G

R
|
R

A
x
G

L

M

K

K

D

A

A

K

E

E

T

N

F

F

E

-

Q

S

Y

L

I

L

T

Y

P

D

L

L

A

A

D

H

K

A

L

L

G

G

A

G

A

A

I

V

G

G

A

G

S
|
S

R
|
R

A
|
A

A

A

V

V

D

D

A

E

G

G

Y

F

V

I

P

E

N

H

D

P

Y

R

Q
|
Q

V
|
V

G
|
G

Q
|
Q

T
x
S

G

G

K

K

I

T

V

V

A

T

P

P

E

K

V

I

Y

Y

I

F

A

A

V

C

G
|
G

I
|
I

S
|
S

G

G

A
x
S

I

V

Q
|
Q

H
|
H

L

K

A

A

G

G

M

M

K

S

D

K

S

S

K

D

V

T

I

I

V

V

A

C

I

I

N
|
N

K
|
K

D

D

P

P

D

D

A

A

P

P

I

M

F

F

Q

E

V

I

A

S

D

K

I

Y

G

G

L

I

V

V

A

G

D
|
D

L
x
A

F

L

N

K

A

I

V

L

P

P

E

L

L

L

T

T

E

A

K

K

L

I

binding flavin-adenine dinucleotide: L125 (≠ Q111), R144 (= R126), I155 (≠ V137), G224 (= G202), R225 (= R203), G226 (≠ A204), S250 (= S229), R251 (= R230), A252 (= A231), Q264 (= Q243), V265 (= V244), G266 (= G245), Q267 (= Q246), S268 (≠ T247), G281 (= G260), I282 (= I261), S283 (= S262), S285 (≠ A264), Q287 (= Q266), H288 (= H267), N302 (= N281), K303 (= K282), D320 (= D299), A321 (≠ L300)

5ol2A The electron transferring flavoprotein/butyryl-coa dehydrogenase complex from clostridium difficile (see paper)
38% identity, 72% coverage: 88:311/311 of query aligns to 93:324/331 of 5ol2A

query
sites
5ol2A

V

V

L

L

A

F

P

G

A

A

T

T

T

S

T

I

G

G

K

R

N

D

I

L

L

A

P

P

R

R

V

V

A

S

A

A

K

R

L

I

D

H

V

T

M

G

Q

L

V
x
T

S

A

D

D

I

C

I

T

A

G

V

L

-

A

-

V

-

A

E

E

G

D

P

T

K

K

T

L

F

L

-

L

-

M

K

T

R
|
R

P

P

I

A

Y

F

A

G

G

G

N

N

A

I

I

M

A

A

T

T

V
x
I

E

V

S

C

G

K

D

D

A

F

K

R

-

P

L

Q

V

M

I

S

T

T

V

V

R

R

A

P

T

G

S

V

F

M

D

K

K

K

A

N

E

E

A

P

T

D

G

E

G

T

S

K

A

E

S

A

V

V

E

I

T

N

-

R

-

F

-

K

V

V

S

E

G

F

A

N

G

D

D

A

A
x
D

G

K

L

L

S

V

S

Q

F

V

V

V

S

Q

L

V

D

I

A

K

V

E

E

A

S

K

E

K

R

Q

P

V

E

K

L

I

T

E

S

D

A

A

G

K

I

I

V

L

V

V

S

S

G

A

G
|
G

R
|
R

A
x
G

L

M

K

G

D

G

A

K

E

E

T

N

F

L

E

D

Q

-

Y

I

I

L

T

Y

P

E

L

L

A

A

D

E

K

I

L

I

G

G

A

G

A

E

I

V

G

S

A

G

S
|
S

R
|
R

A
|
A

A

T

V

I

D

D

A

A

G

G

Y

W

V

L

P

D

N

K

D

A

Y

R

Q
|
Q

V
|
V

G
|
G

Q

Q

T
|
T

G

G

K

K

I

T

V

V

A

R

P

P

E

D

V

L

Y

Y

I

I

A

A

V

C

G
|
G

I
|
I

S
|
S

G

G

A
|
A

I

I

Q
|
Q

H
|
H

L

I

A

A

G

G

M

M

K

E

D

D

S

A

K

E

V

F

I

I

V

V

A

A

I

I

N
|
N

K
|
K

D

N

P

P

D

E

A

A

P

P

I

I

F

F

Q

K

V

Y

A

A

D

D

I

V

G

G

L

I

V

V

A

G

D
|
D

L
x
V

F

H

N

K

A

V

V

L

P

P

E

E

L

L

T

I

E

S

K

Q

L

L

binding calcium ion: D188 (≠ A174)
binding flavin-adenine dinucleotide: T117 (≠ V112), R136 (= R126), I147 (≠ V137), G216 (= G202), R217 (= R203), G218 (≠ A204), S242 (= S229), R243 (= R230), A244 (= A231), Q256 (= Q243), V257 (= V244), G258 (= G245), T260 (= T247), G273 (= G260), I274 (= I261), S275 (= S262), A277 (= A264), Q279 (= Q266), H280 (= H267), N294 (= N281), K295 (= K282), D312 (= D299), V313 (≠ L300)

Sites not aligning to the query:

binding calcium ion: 75

5ow0A Crystal structure of an electron transfer flavoprotein from geobacter metallireducens (see paper)
37% identity, 73% coverage: 85:311/311 of query aligns to 69:291/292 of 5ow0A

query
sites
5ow0A

Y

Y

D

E

A

L

V

I

L

L

A

L

P

S

A

T

T

T

T

A

T

I

G

G

K

S

N

G

I

L

L

A

P

G

R

P

V

L

A

A

A

V

K

S

L

L

D

G

V

A

M

P

Q

I

V

L

S

S

D

E

I

V

I

T

A

A

V

I

E

S

G

P

P

D

K

L

T

T

F

I

K

E

R

R

P

S

I

L

Y

Y

A

G

G

S

N

K

A

A

I

V

A

A

T

R

V

Y

E

K

S

L

G

E

D

S

A

G

K

P

L

L

V

V

I

L

T

T

V

I

R

K

A

R

T

K

S

Y

F

F

D

E

K

A

A

A

E

T

A

L

T

E

G

G

G

T

S

T

A

A

S

T

V

E

E

E

T

L

V

P

S

-

G

-

A

V

G

G

D

P

A

Q

G

K

L

I

S

T

S

L

F

L

V

E

S

E

L

I

D

E

A

E

V

E

E

R

S

T

E

G

R

I

P

P

E

-

L

L

T

E

S

D

A

A

G

E

I

V

V

V

S

T

G

G

G
|
G

R
|
R

A
x
G

L

I

K

G

D

S

A

G

E

D

T

N

F

F

E

-

Q

S

Y

I

I

L

T

K

P

E

L

I

A

A

D

G

K

M

L

L

G

N

A

G

A

A

I

V

G

G

A

A

S
|
S

R
|
R

A

G

A

A

V

V

D

D

A

E

G

G

Y

W

V

M

P

P

N

P

D

G

Y

A

Q
|
Q

V
x
I

G
|
G

Q

Q

T
|
T

G

G

K

K

I

I

V

V

A

A

P

P

E

T

V

V

Y

Y

I

F

A

A

V

V

G
|
G

I
x
V

S
|
S

G

G

A
|
A

I

S

Q
|
Q

H
|
H

L

L

A

A

G

G

M

I

K

S

D

N

S

A

K

K

V

C

I

V

V

I

A

A

I

I

N
|
N

K
|
K

D

D

P

N

D

E

A

A

P

N

I

I

F

F

Q

K

V

R

A

A

D

R

I

F

G

G

L

I

V

V

A

G

D
|
D

L
x
Y

F

K

N

K

A

A

V

V

P

P

E

A

L

L

T

I

E

N

K

A

L

L

binding flavin-adenine dinucleotide: G183 (= G202), R184 (= R203), G185 (≠ A204), S209 (= S229), R210 (= R230), Q223 (= Q243), I224 (≠ V244), G225 (= G245), T227 (= T247), G240 (= G260), V241 (≠ I261), S242 (= S262), A244 (= A264), Q246 (= Q266), H247 (= H267), N261 (= N281), K262 (= K282), D279 (= D299), Y280 (≠ L300)

7qh2A Cryo-em structure of ldh-etfab complex from acetobacterium woodii (see paper)
30% identity, 91% coverage: 25:307/311 of query aligns to 39:327/337 of 7qh2A

query
sites
7qh2A

A

A

A

V

L

I

G

G

G

H

P

P

V

V

H

Y

V

A

L

L

A

M

G

G

G

T

D

N

D

I

A

T

A

E

A

K

A

A

G

D

D

E

A

L

A

K

K

-

I

-

A

Y

G

G

V

V

E

D

K

K

V

V

L

F

V

V

A

Y

S

D

D

K

A

P

A

E

Y

L

A

K

N

H

G

F

L

V

A

I

E

E

N

P

V

Y

A

A

P

N

L

V

I

L

V

E

G

D

L

F

M

I

D

E

G

K

Y

V

D

K

-

P

-

S

A

S

V

I

L

L

A

V

P

G

A

A

T

T

T

N

T

V

G

G

K

R

N

S

I

L

L

A

P

P

R

R

V

V

A

A

K

R

-

Y

-

R

-

T

-

G

-
x
L

-
x
T

-

A

-

D

-

C

-

T

-

I

L

L

D

E

V

M

M

K

Q

E

V

N

S

T

D

D

I

L

I

V

A

Q

V

I

E

-

G

-

P

-

K

-

T

-

F

-

K

-

R
|
R

P

P

I

A

Y

F

A

G

G

G

N

N

A

I

I

M

A

A

T

Q

V
x
I

E

V

S

T

G

E

D

N

A

T

K

R

-

P

L

Q

V

F

I

C

T

T

V

V

R

R

A

Y

T

K

S

V

F

F

D

T

K

A

A

P

E

E

A

R

T

V

G

N

G

E

-

P

S

W

A

G

S

D

V

V

E

E

T

M

V

M

S

D

G

I

A

E

G

K

D

A

A

K

G

L

L

V

S

S

S

A

F

I

V

E

S

V

L

M

D

E

A

V

V

I

E

K

S

K

E

E

R

K

-

G

P

I

E

D

L

L

T

S

S

E

A

A

G

E

I

T

V

I

V

V

S

A

G

V

G

G

R
|
R

A
x
G

L

V

K

K

D

C

A

E

E

K

T

D

F

L

E

D

Q

M

Y

-

I

I

T

H

P

E

L

F

A

A

D

E

K

K

L

I

G

G

A

A

A

T

I

V

G

A

A

C

S
x
T

R
|
R

A

P

A

G

V

I

D

E

A

A

G

G

Y

W

V

F

P

D

N

A

D

R

Y

L

Q
|
Q

V
x
I

G
|
G

Q
x
L

T
x
S

G

G

K

R

I

T

V

V

A

K

P

P

E

K

V

L

Y

I

I

I

A

A

V

L

G
|
G

I
|
I

S
|
S

G

G

A

A

I

V

Q
|
Q

H

F

L

A

A

A

G

G

M

M

K

Q

D

N

S

S

K

E

V

Y

I

I

V

I

A

A

I

I

N
|
N

K
x
S

D
|
D

P

P

D

K

A

A

P

P

I

I

F

F

Q

N

V

I

A

A

D

H

I

C

G

G

L

M

V

V

A

G

D
|
D

L
|
L

F

Y

N

E

A

I

V

L

P

P

E

E

L

L

binding flavin-adenine dinucleotide: L125 (vs. gap), T126 (vs. gap), R144 (= R126), I155 (≠ V137), R224 (= R203), G225 (≠ A204), T249 (≠ S229), R250 (= R230), Q263 (= Q243), I264 (≠ V244), G265 (= G245), L266 (≠ Q246), S267 (≠ T247), G280 (= G260), I281 (= I261), S282 (= S262), Q286 (= Q266), N301 (= N281), S302 (≠ K282), D303 (= D283), D319 (= D299), L320 (= L300)

7koeB Electron bifurcating flavoprotein fix/etfabcx (see paper)
34% identity, 99% coverage: 4:311/311 of query aligns to 8:327/336 of 7koeB

query
sites
7koeB

L

F

V

V

L

L

A

I

E

E

T

H

N

H

G

G

A

G

E

K

I

A

A

H

D

P

A

V

T

S

F

W

A

E

T

L

V

I

T

G

A

K

A

A

A

R

A

D

L

L

G

A

G

S

P

K

V

L

H

E

-

N

-

S

-

E

-

V

-

W

-

G

V

V

L

L

A

G

G

E

G

G

D

L

D

E

A

S

A

V

A

A

A

K

G

-

D

-

A

-

A

E

A

A

K

I

I

Q

A

R

G

G

V

A

E

D

K

K

V

V

L

L

V

Y

A

V

S

K

D

N

A

R

A

E

Y

F

A

N

N

T

G

Y

L

V

A

N

E

Y

N

L

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Y

A

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P

K

L

A

I

L

V

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G

D

L

M

M

V

D

R

G

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Y

Y

-

R

-

P

D

E

A

I

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F

L

L

A

I

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G

A

A

T

T

T

L

T

E

G

G

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N

E

I

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L

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P

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M

V

V

A

A

A

T

K

E

L

L

D

E

V

T

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G

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L

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x
T

S

A

D

D

-

C

-

T

-

G

-

L

-

D

I

I

A

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K

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L

T

A

F

M

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R
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R

P

P

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x
T

Y

F

A

G

G

G

N

N

A

L

I

M

A

A

T

T

V

I

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M

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C

G

P

D

D

A

H

K

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-

P

L

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I

A

T

T

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V

R

R

A

P

T

G

S

V

F

M

D

K

K

E

-

L

-

P

-

D

A

P

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E

A

R

T

T

G

G

G

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I

A

I

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N

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A

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G

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x
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x
G

L

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G

D

G

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P

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E

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G

F

F

E

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K

Y

-

I

L

T

K

P

E

L

L

A

A

D

D

K

L

L

L

G

G

A

G

A

E

I

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G

G

A

A

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S

R
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R

A
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A

A

A

V

V

D

K

A

A

G

G

Y

W

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N

P

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E

Y

H

Q
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Q

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V

G
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G

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Q

T
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T

G

G

K

K

I

T

V

V

A

R

P

P

E

V

V

L

Y

Y

I

F

A

A

V

C

G
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G

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I

S
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S

G

G

A

A

I

I

Q
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Q

H
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H

L

V

A

V

G

G

M

I

K

K

D

E

S

S

K

E

V

I

I

I

V

V

A

A

I

I

N
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N

K
x
I

D

D

P

E

D

K

A

A

P

P

I

I

F

F

Q

D

V

I

A

A

D

D

I

I

G

G

L

I

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V

A

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D

D

L
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L

F

H

N

K

A

V

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V

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P

E

A

L

L

T

T

E

A

K

K

L

L

binding flavin-adenine dinucleotide: T121 (≠ V112), R140 (= R126), T142 (≠ I128), G219 (= G202), K220 (≠ R203), G221 (≠ A204), S245 (= S229), R246 (= R230), A247 (= A231), Q259 (= Q243), V260 (= V244), G261 (= G245), Q262 (= Q246), T263 (= T247), G276 (= G260), S278 (= S262), Q282 (= Q266), H283 (= H267), N297 (= N281), I298 (≠ K282), L316 (= L300)

P53571 Electron transfer flavoprotein subunit alpha; Alpha-ETF; Electron transfer flavoprotein large subunit; ETFLS from Methylophilus methylotrophus (Bacterium W3A1) (see 2 papers)
39% identity, 55% coverage: 140:311/311 of query aligns to 148:319/321 of P53571

query
sites
P53571

G

G

D

K

A

S

K

T

L

V

V

V

I

L

T

T

V

I

R

R

A

P

T

S

S

V

F

F

D

K

K

P

A

L

E

E

A

G

T

A

G

G

G

-

S

S

A

P

S

V

V

V

E

S

T

N

V

V

S

D

G

A

A

P

G

S

D

V

A

Q

G

S

L

R

S

S

S

Q

F

-

V

-

S

N

L

K

D

D

A

Y

V

V

E

E

-

V

-

G

S

G

E

N

R

D

P

I

E

D

L

I

T

T

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T

A

V

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D

I

F

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I

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M

S

S

G

I

G

G

R
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R

A

G

L

I

K

G

D

E

A

E

E

T

T

N

F

V

E

E

Q

Q

Y

F

I

-

T

R

P

E

L

L

A

A

D

D

K

E

L

A

G

G

A

A

A

T

I

L

G

C

A

C

S
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S

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R

A

P

A

I

V

A

D

D

A

A

G

G

Y

W

V

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P

N

K

D

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Y

R

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Q

V
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V

G
|
G

Q
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Q

T
x
S

G

G

K

K

I

V

V

V

-

G

A

S

P

C

E

K

V

L

Y

Y

I

V

A

A

V

M

G
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G

I
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I

S
|
S

G
|
G

A
x
S

I
|
I

Q
|
Q

H
|
H

L

M

A

A

G

G

M

M

K

K

D

H

S

V

K

P

V

T

I

I

V

I

A

A

I

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N
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N

K

T

D

D

P

P

D

G

A

A

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S

I

I

F

F

Q

T

V

I

A

A

D

K

I

Y

G

G

L

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A

A

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D

L
x
I

F

F

N

D

A

I

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E

E

E

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L

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L

R211 (= R203) binding FAD
SR 236:237 (= SR 229:230) binding FAD
QVGQS 250:254 (≠ QVGQT 243:247) binding FAD
268:275 (vs. 260:267, 88% identical) binding FAD
N289 (= N281) binding FAD
DI 307:308 (≠ DL 299:300) binding FAD

Sites not aligning to the query:

1 modified: Initiator methionine, Removed

3clrD Crystal structure of the r236a etf mutant from m. Methylotrophus (see paper)
38% identity, 55% coverage: 140:311/311 of query aligns to 147:318/319 of 3clrD

query
sites
3clrD

G

G

D

K

A

S

K

T

L

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V

V

I

L

T

T

V

I

R

R

A

P

T

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S

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F

F

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K

K

P

A

L

E

E

A

G

T

A

G

G

G

-

S

S

A

P

S

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V

V

E

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T

N

V

V

S

D

G

A

A

P

G

S

D

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A

Q

G

S

L

R

S

S

S

Q

F

-

V

-

S

N

L

K

D

D

A

Y

V

V

E

E

-

V

-

G

S

G

E

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R

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E

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I

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G

R
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R

A
x
G

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I

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G

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E

A

E

E

T

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N

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E

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Q

Y

F

I

-

T

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P

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L

L

A

A

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K

E

L

A

G

G

A

A

A

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I

L

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C

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S

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x
A

A
x
P

A

I

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A

D

D

A

A

G

G

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W

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P

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K

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Q

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V

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G

Q
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Q

T
x
S

G

G

K

K

I

V

V

V

-

G

A

S

P

C

E

K

V

L

Y

Y

I

V

A

A

V

M

G
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G

I
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I

S
|
S

G

G

A
x
S

I

I

Q
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Q

H
|
H

L

M

A

A

G

G

M

M

K

K

D

H

S

V

K

P

V

T

I

I

V

I

A

A

I

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N
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N

K
x
T

D

D

P

P

D

G

A

A

P

S

I

I

F

F

Q

T

V

I

A

A

D

K

I

Y

G

G

L

I

V

V

A

A

D
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D

L
x
I

F

F

N

D

A

I

V

E

P

E

E

E

L

L

T

K

E

A

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L

L

binding flavin-adenine dinucleotide: G209 (= G202), R210 (= R203), G211 (≠ A204), S235 (= S229), A236 (≠ R230), P237 (≠ A231), Q249 (= Q243), V250 (= V244), G251 (= G245), Q252 (= Q246), S253 (≠ T247), G267 (= G260), I268 (= I261), S269 (= S262), S271 (≠ A264), Q273 (= Q266), H274 (= H267), N288 (= N281), T289 (≠ K282), D306 (= D299), I307 (≠ L300)

Query Sequence

>WP_047006968.1 NCBI__GCF_001010925.1:WP_047006968.1
MTSLVLAETNGAEIADATFATVTAAAALGGPVHVLLAGGDDAAAAGDAAAKIAGVEKVLV
ASDAAYANGLAENVAPLIVGLMDGYDAVLAPATTTGKNILPRVAAKLDVMQVSDIIAVEG
PKTFKRPIYAGNAIATVESGDAKLVITVRATSFDKAEATGGSASVETVSGAGDAGLSSFV
SLDAVESERPELTSAGIVVSGGRALKDAETFEQYITPLADKLGAAIGASRAAVDAGYVPN
DYQVGQTGKIVAPEVYIAVGISGAIQHLAGMKDSKVIVAINKDPDAPIFQVADIGLVADL
FNAVPELTEKL

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory