SitesBLAST
Comparing WP_047007470.1 NCBI__GCF_001010925.1:WP_047007470.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
5u0mA Fatty aldehyde dehydrogenase from marinobacter aquaeolei vt8 and cofactor complex (see paper)
49% identity, 93% coverage: 18:466/481 of query aligns to 22:472/488 of 5u0mA
- active site: N148 (= N142), K171 (= K165), E246 (= E240), C280 (= C274), E377 (= E371), P455 (= P449)
- binding nicotinamide-adenine-dinucleotide: F144 (≠ L138), Y147 (= Y141), N148 (= N142), K171 (= K165), S173 (= S167), E174 (= E168), G207 (= G201), T222 (= T216), G223 (= G217), S224 (= S218), V227 (= V221), E246 (= E240), M247 (= M241), G248 (= G242), C280 (= C274), E377 (= E371), F379 (= F373)
5u0lA X-ray crystal structure of fatty aldehyde dehydrogenase enzymes from marinobacter aquaeolei vt8 complexed with a substrate (see paper)
49% identity, 93% coverage: 18:466/481 of query aligns to 22:472/488 of 5u0lA
- active site: N148 (= N142), K171 (= K165), E246 (= E240), C280 (= C274), E377 (= E371), P455 (= P449)
- binding decanal: K107 (= K100), H152 (= H146), L153 (= L147), G156 (= G150), H157 (= H151), S456 (≠ A450), A457 (= A451)
3ju8A Crystal structure of succinylglutamic semialdehyde dehydrogenase from pseudomonas aeruginosa.
48% identity, 95% coverage: 16:474/481 of query aligns to 19:478/486 of 3ju8A
- active site: N147 (= N142), K170 (= K165), E245 (= E240), C279 (= C274), E377 (= E371), P455 (= P449)
- binding nicotinamide-adenine-dinucleotide: G144 (= G139), Y146 (= Y141), N147 (= N142), L152 (= L147), K170 (= K165), S172 (= S167), F220 (= F215), T221 (= T216), G222 (= G217), S223 (= S218), T226 (≠ V221), E245 (= E240), M246 (= M241), G247 (= G242), C279 (= C274), E377 (= E371), F379 (= F373), F444 (= F438)
4o6rA Crystal structure of a putative aldehyde dehydrogenase from burkholderia cenocepacia
32% identity, 88% coverage: 34:457/481 of query aligns to 42:469/489 of 4o6rA
- active site: N150 (= N142), K173 (= K165), E248 (= E240), C282 (= C274), E383 (= E371), E460 (≠ P449)
- binding adenosine monophosphate: I146 (≠ L138), V147 (≠ G139), K173 (= K165), G206 (= G197), G210 (= G201), Q211 (≠ K202), F224 (= F215), G226 (= G217), S227 (= S218), T230 (≠ V221), R233 (≠ A224)
4pz2B Structure of zm aldh2-6 (rf2f) in complex with NAD (see paper)
31% identity, 90% coverage: 34:467/481 of query aligns to 49:488/494 of 4pz2B
- active site: N159 (= N142), K182 (= K165), E258 (= E240), C292 (= C274), E392 (= E371), D469 (≠ P449)
- binding nicotinamide-adenine-dinucleotide: I155 (≠ L138), I156 (≠ G139), P157 (= P140), W158 (≠ Y141), N159 (= N142), M164 (≠ L147), K182 (= K165), A184 (≠ S167), E185 (= E168), G215 (= G197), G219 (= G201), F233 (= F215), T234 (= T216), G235 (= G217), S236 (= S218), V239 (= V221), E258 (= E240), L259 (≠ M241), C292 (= C274), E392 (= E371), F394 (= F373)
6b5hA Aldh1a2 liganded with NAD and 1-(4-cyanophenyl)-n-(3-fluorophenyl)-3- [4-(methylsulfonyl)phenyl]-1h-pyrazole-4-carboxamide (compound cm121) (see paper)
30% identity, 89% coverage: 19:448/481 of query aligns to 32:467/492 of 6b5hA
- active site: N161 (= N142), E260 (= E240), C294 (= C274)
- binding 1-(4-cyanophenyl)-N-(3-fluorophenyl)-3-[4-(methylsulfonyl)phenyl]-1H-pyrazole-4-carboxamide: V112 (≠ T92), G116 (≠ A96), F162 (= F143), W169 (≠ G150), Q284 (= Q264), F288 (≠ T268), T295 (= T275), N449 (= N430), L451 (≠ A432), N452 (≠ S433), F457 (= F438)
- binding nicotinamide-adenine-dinucleotide: I157 (≠ L138), I158 (≠ G139), W160 (≠ Y141), N161 (= N142), K184 (= K165), G217 (= G197), G221 (= G201), F235 (= F215), T236 (= T216), G237 (= G217), S238 (= S218), V241 (= V221), E260 (= E240), L261 (≠ M241), C294 (= C274), F393 (= F373)
Sites not aligning to the query:
6b5gA Aldh1a2 liganded with NAD and (3-ethoxythiophen-2-yl){4-[4-nitro-3- (pyrrolidin-1-yl)phenyl]piperazin-1-yl}methanone (compound 6-118) (see paper)
30% identity, 89% coverage: 19:448/481 of query aligns to 32:467/492 of 6b5gA
- active site: N161 (= N142), E260 (= E240), C294 (= C274)
- binding (3-ethoxythiophen-2-yl){4-[4-nitro-3-(pyrrolidin-1-yl)phenyl]piperazin-1-yl}methanone: F162 (= F143), L165 (≠ H146), W169 (≠ G150), F288 (≠ T268), C293 (≠ R273), C294 (= C274), T295 (= T275), N449 (= N430), L451 (≠ A432)
- binding nicotinamide-adenine-dinucleotide: I157 (≠ L138), I158 (≠ G139), P159 (= P140), W160 (≠ Y141), N161 (= N142), M166 (≠ L147), K184 (= K165), E187 (= E168), G217 (= G197), G221 (= G201), F235 (= F215), T236 (= T216), G237 (= G217), S238 (= S218), V241 (= V221), E260 (= E240), L261 (≠ M241), C294 (= C274), E391 (= E371), F393 (= F373)
Sites not aligning to the query:
6aljA Aldh1a2 liganded with NAD and compound win18,446 (see paper)
30% identity, 89% coverage: 19:448/481 of query aligns to 32:467/492 of 6aljA
- active site: N161 (= N142), E260 (= E240), C294 (= C274)
- binding N,N'-(octane-1,8-diyl)bis(2,2-dichloroacetamide): G116 (≠ A96), F162 (= F143), L165 (≠ H146), M166 (≠ L147), W169 (≠ G150), E260 (= E240), C293 (≠ R273), C294 (= C274), L451 (≠ A432), N452 (≠ S433), A453 (≠ S434)
- binding nicotinamide-adenine-dinucleotide: I157 (≠ L138), I158 (≠ G139), P159 (= P140), W160 (≠ Y141), N161 (= N142), K184 (= K165), E187 (= E168), G217 (= G197), G221 (= G201), F235 (= F215), G237 (= G217), S238 (= S218), V241 (= V221), Q341 (≠ T322), K344 (≠ Q325), E391 (= E371), F393 (= F373)
Sites not aligning to the query:
O94788 Retinal dehydrogenase 2; RALDH 2; RalDH2; Aldehyde dehydrogenase family 1 member A2; ALDH1A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II); EC 1.2.1.36 from Homo sapiens (Human) (see 6 papers)
30% identity, 89% coverage: 19:448/481 of query aligns to 58:493/518 of O94788
- A110 (≠ V65) to V: in dbSNP:rs35365164
- Q182 (≠ V137) to K: in DIH4; decreased retinoic acid biosynthetic process
- IPW 184:186 (≠ GPY 139:141) binding NAD(+)
- KPAE 210:213 (≠ KPSE 165:168) binding NAD(+)
- STE 264:266 (≠ SAQ 218:220) binding NAD(+)
- C320 (= C274) active site, Nucleophile
- R347 (≠ L301) to H: in DIH4; decreased expression; dbSNP:rs141245344
- V348 (≠ L302) to I: in dbSNP:rs4646626
- KQYNK 366:370 (≠ QTADQ 321:325) binding NAD(+)
- A383 (≠ G338) to T: in DIH4; uncertain significance; dbSNP:rs749124508
- E417 (= E371) binding NAD(+)
- E436 (≠ A390) to K: in dbSNP:rs34744827
- S461 (≠ W415) to Y: in DIH4; decreased retinoic acid biosynthetic process
Sites not aligning to the query:
- 50 E → G: in dbSNP:rs34266719
Q63639 Retinal dehydrogenase 2; RALDH 2; RalDH2; Aldehyde dehydrogenase family 1 member A2; ALDH1A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II); EC 1.2.1.36 from Rattus norvegicus (Rat) (see paper)
29% identity, 89% coverage: 21:448/481 of query aligns to 60:493/518 of Q63639