Comparing WP_048058439.1 NCBI__GCF_000016125.1:WP_048058439.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P07821 Iron(3+)-hydroxamate import ATP-binding protein FhuC; Ferric hydroxamate uptake protein C; Ferrichrome transport ATP-binding protein FhuC; Iron(III)-hydroxamate import ATP-binding protein FhuC; EC 7.2.2.16 from Escherichia coli (strain K12) (see 2 papers)
32% identity, 91% coverage: 8:238/253 of query aligns to 17:251/265 of P07821
1f3oA Crystal structure of mj0796 atp-binding cassette (see paper)
35% identity, 79% coverage: 18:217/253 of query aligns to 21:226/232 of 1f3oA
Sites not aligning to the query:
1l2tA Dimeric structure of mj0796, a bacterial abc transporter cassette (see paper)
35% identity, 79% coverage: 18:217/253 of query aligns to 21:226/230 of 1l2tA
Sites not aligning to the query:
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
34% identity, 88% coverage: 2:223/253 of query aligns to 1:223/240 of 4ymuJ
7mdyC Lolcde nucleotide-bound
34% identity, 80% coverage: 15:217/253 of query aligns to 19:223/226 of 7mdyC
Sites not aligning to the query:
P75957 Lipoprotein-releasing system ATP-binding protein LolD; EC 7.6.2.- from Escherichia coli (strain K12) (see paper)
34% identity, 80% coverage: 15:217/253 of query aligns to 22:226/233 of P75957
3c4jA Abc protein artp in complex with atp-gamma-s
32% identity, 87% coverage: 2:221/253 of query aligns to 3:223/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
32% identity, 87% coverage: 2:221/253 of query aligns to 3:223/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
32% identity, 87% coverage: 2:221/253 of query aligns to 3:223/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
32% identity, 87% coverage: 2:221/253 of query aligns to 3:223/242 of 2oljA
7v8iD Lolcd(e171q)e with bound amppnp in nanodiscs (see paper)
31% identity, 86% coverage: 1:217/253 of query aligns to 3:225/229 of 7v8iD
7arlD Lolcde in complex with lipoprotein and adp (see paper)
33% identity, 80% coverage: 15:216/253 of query aligns to 19:222/222 of 7arlD
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
32% identity, 89% coverage: 2:226/253 of query aligns to 2:226/241 of 4u00A
3nhaA Nucleotide binding domain of human abcb6 (adp mg bound structure) (see paper)
29% identity, 87% coverage: 3:223/253 of query aligns to 41:261/278 of 3nhaA
2pclA Crystal structure of abc transporter with complex (aq_297) from aquifex aeolicus vf5
36% identity, 81% coverage: 13:217/253 of query aligns to 14:219/223 of 2pclA
4q4aA Improved model of amp-pnp bound tm287/288 (see paper)
32% identity, 85% coverage: 3:218/253 of query aligns to 335:552/572 of 4q4aA
Sites not aligning to the query:
8g4cB Bceabs atpgs high res tm (see paper)
33% identity, 89% coverage: 11:234/253 of query aligns to 16:245/248 of 8g4cB
Sites not aligning to the query:
6quzA Structure of atpgs-bound outward-facing tm287/288 in complex with sybody sb_tm35 (see paper)
32% identity, 85% coverage: 3:218/253 of query aligns to 331:548/568 of 6quzA
6qv0A Structure of atp-bound outward-facing tm287/288 in complex with sybody sb_tm35 (see paper)
32% identity, 85% coverage: 3:218/253 of query aligns to 331:548/568 of 6qv0A
7tchB Bceab e169q variant atp-bound conformation (see paper)
32% identity, 89% coverage: 11:234/253 of query aligns to 15:244/245 of 7tchB