Comparing WP_048065055.1 NCBI__GCF_000007345.1:WP_048065055.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 5 hits to proteins with known functional sites (download)
P54955 N-acetylcysteine deacetylase; S-(2-succino)cysteine metabolism operon protein P; EC 3.5.1.- from Bacillus subtilis (strain 168)
36% identity, 93% coverage: 8:398/419 of query aligns to 4:377/380 of P54955
4ewtA The crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus (see paper)
35% identity, 93% coverage: 11:398/419 of query aligns to 13:389/389 of 4ewtA
O04373 IAA-amino acid hydrolase ILR1-like 4; jasmonoyl-L-amino acid hydrolase; EC 3.5.1.-; EC 3.5.1.127 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
31% identity, 98% coverage: 10:418/419 of query aligns to 44:440/440 of O04373
P54968 IAA-amino acid hydrolase ILR1; EC 3.5.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
31% identity, 94% coverage: 3:397/419 of query aligns to 44:427/442 of P54968
6slfA Nalpha-acylglutamine aminoacylase from corynebacterium sp.Releasing human axilla odorants co-crystallised with high affinity inhibitor (see paper)
33% identity, 74% coverage: 17:327/419 of query aligns to 22:326/398 of 6slfA
Sites not aligning to the query:
>WP_048065055.1 NCBI__GCF_000007345.1:WP_048065055.1
MREDPSAETFEAWIIRLRREFHRYPELSFEEYETQKRILKILEELGIEARKIADTGVLAS
IKGTMPGPCIALRTDTDGLQVQEEFTERNEGYISRNDGVMHACGHDGHMAMLFGAARLFV
ENRDFPGEVRLIFQPAEEIPPGGSERVIAEGGLKGVDAVMGMHIFTNHESGSVGFRPGPF
MASTNRFEIVFKGKGGHISKPESCIDPVRMATDFISSIYPALEKQLEPDKYVLGVGRIQG
GAQFNRTPDRVEALGSYRTFDSRTTEIIDLTIKECLERIKERYVKPGEEFAGLPDYELDV
LHGYPVLVNDPVFTDAVNLKLQESFPELTIYPELEKTFAAEDFASYLRVVPGIFISLGTL
NQKERIVEINHSSTFDIDEKILRTGTEIFYTISLDFLKHPEKYLDPQSKEKTNDNPELR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory