Comparing WP_048080437.1 NCBI__GCF_000745485.1:WP_048080437.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P62003 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Pyrococcus woesei (see 2 papers)
62% identity, 100% coverage: 1:226/226 of query aligns to 1:225/228 of P62003
1hg3A Crystal structure of tetrameric tim from pyrococcus woesei. (see paper)
62% identity, 97% coverage: 8:226/226 of query aligns to 6:224/224 of 1hg3A
1w0mA Triosephosphate isomerase from thermoproteus tenax (see paper)
47% identity, 95% coverage: 8:222/226 of query aligns to 4:218/225 of 1w0mA
Q8NKN9 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Thermoproteus tenax (strain ATCC 35583 / DSM 2078 / JCM 9277 / NBRC 100435 / Kra 1) (see paper)
47% identity, 95% coverage: 8:222/226 of query aligns to 4:218/226 of Q8NKN9
5cssA Crystal structure of triosephosphate isomerase from thermoplasma acidophilum with glycerol 3-phosphate (see paper)
36% identity, 94% coverage: 11:223/226 of query aligns to 5:213/214 of 5cssA
5csrC Crystal structure of triosephosphate isomerase from thermoplasma acidophilium (see paper)
36% identity, 94% coverage: 11:223/226 of query aligns to 5:213/220 of 5csrC
P50921 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Moritella marina (Vibrio marinus) (see paper)
32% identity, 52% coverage: 8:124/226 of query aligns to 4:128/256 of P50921
Sites not aligning to the query:
1aw1A Triosephosphate isomerase of vibrio marinus complexed with 2- phosphoglycolate (see paper)
32% identity, 52% coverage: 8:124/226 of query aligns to 3:127/255 of 1aw1A
Sites not aligning to the query:
5eywA Crystal structure of litopenaeus vannamei triosephosphate isomerase complexed with 2-phosphoglycolic acid (see paper)
26% identity, 76% coverage: 43:213/226 of query aligns to 37:236/244 of 5eywA
Sites not aligning to the query:
1ssgA Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase (see paper)
25% identity, 74% coverage: 24:190/226 of query aligns to 28:215/247 of 1ssgA
Sites not aligning to the query:
P00939 Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Oryctolagus cuniculus (Rabbit) (see 2 papers)
34% identity, 36% coverage: 43:124/226 of query aligns to 40:127/249 of P00939
Sites not aligning to the query:
1r2rB Crystal structure of rabbit muscle triosephosphate isomerase (see paper)
34% identity, 36% coverage: 43:124/226 of query aligns to 38:125/247 of 1r2rB
Sites not aligning to the query:
P00940 Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Gallus gallus (Chicken) (see 3 papers)
34% identity, 45% coverage: 24:124/226 of query aligns to 29:126/248 of P00940
Sites not aligning to the query:
4owgA Crystal structure of rabbit muscle triosephosphate isomerase-pep complex
34% identity, 36% coverage: 43:124/226 of query aligns to 37:124/246 of 4owgA
Sites not aligning to the query:
4mvaA 1.43 angstrom resolution crystal structure of triosephosphate isomerase (tpia) from escherichia coli in complex with acetyl phosphate. (see paper)
27% identity, 58% coverage: 40:169/226 of query aligns to 35:191/255 of 4mvaA
Sites not aligning to the query:
B1XB85 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Escherichia coli (strain K12 / DH10B) (see paper)
27% identity, 58% coverage: 40:169/226 of query aligns to 35:191/255 of B1XB85
Sites not aligning to the query:
P17751 Triosephosphate isomerase; TIM; Methylglyoxal synthase; Triose-phosphate isomerase; EC 5.3.1.1; EC 4.2.3.3 from Mus musculus (Mouse) (see paper)
33% identity, 38% coverage: 40:124/226 of query aligns to 37:127/249 of P17751
Sites not aligning to the query:
1tpb1 Offset of a catalytic lesion by a bound water soluble (see paper)
34% identity, 45% coverage: 24:124/226 of query aligns to 26:123/245 of 1tpb1
Sites not aligning to the query:
A0A1L5YRA2 Triosephosphate isomerase; TIM; Allergen Scy p 8; Methylglyoxal synthase; Triose-phosphate isomerase; Allergen Scy p 8.0101; EC 5.3.1.1; EC 4.2.3.3 from Scylla paramamosain (Mud crab) (see paper)
27% identity, 64% coverage: 46:190/226 of query aligns to 43:216/248 of A0A1L5YRA2
Sites not aligning to the query:
1htiB Crystal structure of recombinant human triosephosphate isomerase at 2.8 angstroms resolution. Triosephosphate isomerase related human genetic disorders and comparison with the trypanosomal enzyme (see paper)
35% identity, 36% coverage: 43:124/226 of query aligns to 39:126/248 of 1htiB
Sites not aligning to the query:
>WP_048080437.1 NCBI__GCF_000745485.1:WP_048080437.1
MNEIKETPIVILNFKTYLESTGENALKLAKSSEMVAEETGVNIMVAPQYADIYRIAREVN
IPVLAQHIDTIDAGGHTGSILPECVKEAGAVGTLINHSERRVELFEIDAAIKKADSLGLS
TVVCTNNIETSSAAATLNPNFVAIEPPELIGSGIPVSKAEPEIVEKTVESIHNINPEVRV
LCGAGISTGDDLKAAIDLGSEGVLLASGIILADDPKKALLDLVSKI
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
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