SitesBLAST
Comparing WP_049989382.1 NCBI__GCF_000784335.1:WP_049989382.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3ddnB Crystal structure of hydroxypyruvic acid phosphate bound d-3- phosphoglycerate dehydrogenase in mycobacterium tuberculosis (see paper)
42% identity, 97% coverage: 3:512/528 of query aligns to 5:512/525 of 3ddnB
3dc2A Crystal structure of serine bound d-3-phosphoglycerate dehydrogenase from mycobacterium tuberculosis (see paper)
42% identity, 97% coverage: 3:512/528 of query aligns to 4:513/526 of 3dc2A
- active site: N96 (= N96), R230 (= R229), D254 (= D253), E259 (= E258), H277 (= H277)
- binding serine: Y458 (≠ N457), D460 (= D459), R461 (≠ E460), P462 (= P461), G463 (= G462), A464 (≠ V463), L465 (≠ I464), L484 (≠ N483)
O43175 D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens (Human) (see 3 papers)
39% identity, 76% coverage: 2:401/528 of query aligns to 8:409/533 of O43175
- T78 (≠ I72) binding NAD(+)
- R135 (≠ K129) to W: in PHGDHD; results in a 2-fold decrease in enzyme activity with 3-phosphohydroxypyruvate, but no change in substrate affinity; dbSNP:rs267606949
- RI 155:156 (≠ RV 149:150) binding NAD(+)
- D175 (= D169) binding NAD(+)
- T207 (= T201) binding NAD(+)
- CAR 234:236 (= CAR 227:229) binding NAD(+)
- D260 (= D253) binding NAD(+)
- V261 (= V254) to M: in PHGDHD; results in a four-fold decrease in substrate affinity and a slight increase in maximal enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs267606947
- HLGA 283:286 (= HLGA 277:280) binding NAD(+)
- A373 (≠ S367) to T: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs201553627
- G377 (= G371) to S: in PHGDHD; results in a 2-fold decrease in enzyme activity with 3-phosphohydroxypyruvate, but no change in substrate affinity; dbSNP:rs267606948
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 2 modified: N-acetylalanine
- 425 V → M: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs121907988
- 490 V → M: in PHGDHD; results in almost undetectable enzyme activity with 3-phosphohydroxypyruvate; dbSNP:rs121907987
6plgA Crystal structure of human phgdh complexed with compound 15 (see paper)
46% identity, 56% coverage: 2:296/528 of query aligns to 3:297/303 of 6plgA
7ewhA Crystal structure of human phgdh in complex with homoharringtonine (see paper)
46% identity, 56% coverage: 2:296/528 of query aligns to 3:297/302 of 7ewhA
- binding (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine: L146 (≠ V145), G147 (= G146), L148 (= L147), G149 (= G148), R150 (= R149), I151 (≠ V150), G152 (= G151), D170 (= D169), H201 (= H200), T202 (= T201), P203 (= P202)
6rihA Crystal structure of phgdh in complex with compound 9 (see paper)
46% identity, 56% coverage: 2:296/528 of query aligns to 3:297/302 of 6rihA
6rj5A Crystal structure of phgdh in complex with compound 39 (see paper)
46% identity, 56% coverage: 2:296/528 of query aligns to 3:297/301 of 6rj5A
6plfA Crystal structure of human phgdh complexed with compound 1 (see paper)
46% identity, 56% coverage: 2:296/528 of query aligns to 4:298/305 of 6plfA
7dkmA Phgdh covalently linked to oridonin (see paper)
46% identity, 56% coverage: 2:296/528 of query aligns to 4:298/306 of 7dkmA
- binding nicotinamide-adenine-dinucleotide: T74 (≠ I72), A102 (= A100), G148 (= G146), R151 (= R149), I152 (≠ V150), Y170 (= Y168), D171 (= D169), P172 (= P170), I173 (≠ Y171), H202 (= H200), T203 (= T201), P204 (= P202), T209 (= T207), C230 (= C227), A231 (= A228), R232 (= R229), H279 (= H277), G281 (= G279)
- binding (1beta,6beta,7beta,8alpha,9beta,10alpha,13alpha,14R,16beta)-1,6,7,14-tetrahydroxy-7,20-epoxykauran-15-one: C14 (≠ A12), K17 (≠ D15), I18 (≠ V16), E293 (≠ T291)
6cwaA Crystal structure phgdh in complex with nadh and 3-phosphoglycerate at 1.77 a resolution (see paper)
46% identity, 56% coverage: 2:296/528 of query aligns to 2:296/299 of 6cwaA
- binding 1,4-dihydronicotinamide adenine dinucleotide: N96 (= N96), A100 (= A100), R149 (= R149), I150 (≠ V150), Y168 (= Y168), D169 (= D169), P170 (= P170), I171 (≠ Y171), H200 (= H200), T201 (= T201), P202 (= P202), T207 (= T207), C228 (= C227), A229 (= A228), R230 (= R229), H277 (= H277), G279 (= G279)
6rj3A Crystal structure of phgdh in complex with compound 15 (see paper)
46% identity, 56% coverage: 2:296/528 of query aligns to 2:296/297 of 6rj3A
6rj2A Crystal structure of phgdh in complex with compound 40 (see paper)
46% identity, 56% coverage: 3:296/528 of query aligns to 1:294/299 of 6rj2A
- binding ~{N}-[(1~{R})-1-[4-(ethanoylsulfamoyl)phenyl]ethyl]-2-methyl-5-phenyl-pyrazole-3-carboxamide: G146 (= G148), I148 (≠ V150), Y166 (= Y168), D167 (= D169), P168 (= P170), I169 (≠ Y171), I170 (= I172), H198 (= H200), T199 (= T201), L208 (= L210), R228 (= R229)
6plfB Crystal structure of human phgdh complexed with compound 1 (see paper)
45% identity, 56% coverage: 2:296/528 of query aligns to 2:288/292 of 6plfB
- binding 4-{(1S)-1-[(5-chloro-6-{[(5S)-2-oxo-1,3-oxazolidin-5-yl]methoxy}-1H-indole-2-carbonyl)amino]-2-hydroxyethyl}benzoic acid: R141 (= R149), Y160 (= Y168), D161 (= D169), P162 (= P170), I164 (= I172), L179 (= L187), T193 (= T201), P194 (= P202), S198 (≠ E206), L202 (= L210)
1wwkA Crystal structure of phosphoglycerate dehydrogenase from pyrococcus horikoshii ot3
46% identity, 57% coverage: 1:303/528 of query aligns to 1:304/304 of 1wwkA