Comparing WP_050654881.1 NCBI__GCF_002893965.1:WP_050654881.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
6co9A Crystal structure of rhodococcus jostii rha1 ipdab cochea-coa complex (see paper)
31% identity, 87% coverage: 20:298/322 of query aligns to 5:287/295 of 6co9A
Q0S7P9 Cholesterol ring-cleaving hydrolase IpdA subunit; (3E)-2-(2-carboxylatoethyl)-3-methyl-6-oxocyclohex-1-ene-1-carboxyl-CoA hydrolase alpha subunit; COCHEA-CoA hydrolase alpha subunit; EC 4.1.99.- from Rhodococcus jostii (strain RHA1) (see paper)
31% identity, 87% coverage: 20:298/322 of query aligns to 6:288/296 of Q0S7P9
>WP_050654881.1 NCBI__GCF_002893965.1:WP_050654881.1
MSSSETDRVRERTRRGTHVDKTLSMKEAVGRYVEDGMTVALEGFSHLIPFAAAHEIIRQG
RKDLTLCRMTPDIVSDQLVAAGCVRKLVASFFASGSAGSLYELRRRIENQDPLPLEVEEY
SHYGMVCRYQAGAARLPFFPLRSYAGSDLPALNPQLRLVEDPYGGGSVYVVPPLNPDVTI
IGAQRADTSGNAQIWGIAGVQQEAVYAAKKAIVVVEELVDDEVIRSDPSRTLIPSHAVDA
VVVCPRGAHPSYAQGYYDRDCGFYRRWTEISKDPSLLRNWLDEWVYTLGDHDEYLAKLGA
DYWSDLEVGPKLSTPVDYGSRL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory