Comparing WP_051305824.1 NCBI__GCF_000429965.1:WP_051305824.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4xeqB Crystal structure of a trap periplasmic solute binding protein from desulfovibrio vulgaris (deval_0042, target efi-510114) bound to copurified (r)-pantoic acid
53% identity, 93% coverage: 23:325/325 of query aligns to 1:303/304 of 4xeqB
4pddA Crystal structure of a trap periplasmic solute binding protein from polaromonas sp js666 (bpro_0088, target efi-510167) bound to d- erythronate (see paper)
37% identity, 85% coverage: 26:300/325 of query aligns to 4:279/303 of 4pddA
4pdhA Crystal structure of a trap periplasmic solute binding protein from polaromonas sp js666 (bpro_1871, target efi-510164) bound to d- erythronate (see paper)
38% identity, 83% coverage: 26:295/325 of query aligns to 4:274/301 of 4pdhA
4pakA Crystal structure of a trap periplasmic solute binding protein from verminephrobacter eiseniae ef01-2 (veis_3954, target efi-510324) a nephridial symbiont of the earthworm eisenia foetida, bound to (r)- pantoic acid (see paper)
37% identity, 85% coverage: 21:295/325 of query aligns to 1:277/304 of 4pakA
4p9kA Crystal structure of a trap periplasmic solute binding protein from verminephrobacter eiseniae ef01-2 (veis_3954, target efi-510324) a nephridial symbiont of the earthworm eisenia foetida, bound to d- erythronate with residual density suggestive of superposition with copurified alternative ligand. (see paper)
37% identity, 83% coverage: 26:295/325 of query aligns to 6:276/303 of 4p9kA
4nq8B Crystal structure of a trap periplasmic solute binding protein from bordetella bronchispeptica (bb3421), target efi-510039, with density modeled as pantoate (see paper)
37% identity, 81% coverage: 26:288/325 of query aligns to 4:267/301 of 4nq8B
7bbrA Crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t (see paper)
33% identity, 81% coverage: 26:288/325 of query aligns to 8:271/310 of 7bbrA
7bcrA Crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t in complex with galactonate (see paper)
33% identity, 81% coverage: 26:288/325 of query aligns to 7:270/310 of 7bcrA
7bcpA Crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t in complex with gluconate (see paper)
33% identity, 81% coverage: 26:288/325 of query aligns to 7:270/310 of 7bcpA
7bcoA Crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t in complex with d-foconate (see paper)
33% identity, 81% coverage: 26:288/325 of query aligns to 7:270/310 of 7bcoA
7bcnA Crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t in complex with xylonic acid (see paper)
33% identity, 81% coverage: 26:288/325 of query aligns to 7:270/310 of 7bcnA
4mhfA Crystal structure of a trap periplasmic solute binding protein from polaromonas sp. Js666 (bpro_3107), target efi-510173, with bound alpha/beta d-glucuronate, space group p21 (see paper)
35% identity, 82% coverage: 39:306/325 of query aligns to 16:290/301 of 4mhfA
Sites not aligning to the query:
4mijA Crystal structure of a trap periplasmic solute binding protein from polaromonas sp. Js666 (bpro_3107), target efi-510173, with bound alpha/beta d-galacturonate, space group p21 (see paper)
35% identity, 82% coverage: 39:306/325 of query aligns to 16:290/302 of 4mijA
Sites not aligning to the query:
Q128M1 Solute-binding protein Bpro_3107 from Polaromonas sp. (strain JS666 / ATCC BAA-500) (see paper)
35% identity, 82% coverage: 39:306/325 of query aligns to 46:320/330 of Q128M1
Sites not aligning to the query:
4n8yA Crystal structure of a trap periplasmic solute binding protein from bradyrhizobium sp. Btai1 b (bbta_0128), target efi-510056 (bbta_0128), complex with alpha/beta-d-galacturonate (see paper)
30% identity, 88% coverage: 34:320/325 of query aligns to 10:297/300 of 4n8yA
Sites not aligning to the query:
4pcdA Crystal structure of a trap periplasmic solute binding protein from roseobacter denitrificans och 114 (rd1_1052, target efi-510238) with bound l-galactonate (see paper)
35% identity, 83% coverage: 20:288/325 of query aligns to 1:269/300 of 4pcdA
4pc9A Crystal structure of a trap periplasmic solute binding protein from rosenbacter denitrificans och 114 (rd1_1052, target efi-510238) with bound d-mannonate (see paper)
35% identity, 83% coverage: 20:288/325 of query aligns to 1:269/300 of 4pc9A
Q16BC9 Solute-binding protein RD1_1052 from Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) (see paper)
36% identity, 81% coverage: 26:288/325 of query aligns to 31:293/325 of Q16BC9
4p3lA Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target efi-510085, with bound glucuronate, spg p6122 (see paper)
29% identity, 90% coverage: 31:323/325 of query aligns to 8:301/303 of 4p3lA
4pf8A Crystal structure of a trap periplasmic solute binding protein from sulfitobacter sp. Nas-14.1 (target efi-510299) with bound beta-d- galacturonate (see paper)
27% identity, 85% coverage: 43:318/325 of query aligns to 19:295/300 of 4pf8A
Sites not aligning to the query:
>WP_051305824.1 NCBI__GCF_000429965.1:WP_051305824.1
MKHLQLTLSLVLVLLFGQLSLAAQEIKLGVVTKPGSAQNIAAEKFKQLLEQASEGRYTVR
IYHSKALGNETEILQQIQMGTVQLGIITVGPFDTFAPIVRVINYPFLFKDNQQADAILDG
PLGQQILTELEQVGFKGLAFSENGFRNLTNNRRPVQAAADVSGLKIRVMASPLHKSIWQA
LGANPTPMPWPIYSELEQGVIDGQENPLWVMEVYKFYEVQNYMSMTRHVYSAHIDVASLL
WWQGLTTADQEMIRSAMQQAALFQRQDNRDRDLARLALLREKGMEIVEQPDIDSFRDRVS
TLKEMKIYQHPKVQALLRQLLAATR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory