Comparing WP_051378279.1 NCBI__GCF_000482785.1:WP_051378279.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q88JU3 3-dehydroshikimate dehydratase; DSD; EC 4.2.1.118 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
52% identity, 100% coverage: 1:671/674 of query aligns to 1:633/635 of Q88JU3
5hmqD Xylose isomerase-like tim barrel/4-hydroxyphenylpyruvate dioxygenase fusion protein
52% identity, 98% coverage: 1:662/674 of query aligns to 3:621/624 of 5hmqD
1cjxA Crystal structure of pseudomonas fluorescens hppd (see paper)
31% identity, 50% coverage: 328:665/674 of query aligns to 4:346/352 of 1cjxA
7xntA Crystal structure of pfhppd-y13161 complex
31% identity, 50% coverage: 328:663/674 of query aligns to 7:340/341 of 7xntA
7x8eA Crystal structure of pfhppd-y13287 complex
31% identity, 50% coverage: 328:665/674 of query aligns to 6:338/341 of 7x8eA
7xntC Crystal structure of pfhppd-y13161 complex
31% identity, 48% coverage: 328:652/674 of query aligns to 6:313/320 of 7xntC
Sites not aligning to the query:
3zgjB S221m v223f y359a mutant of 4-hydroxymandelate synthase from streptomyces coelicolor (see paper)
29% identity, 49% coverage: 335:663/674 of query aligns to 7:341/343 of 3zgjB
Q02110 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; EC 1.13.11.27 from Sus scrofa (Pig) (see paper)
28% identity, 26% coverage: 475:652/674 of query aligns to 177:363/393 of Q02110
Sites not aligning to the query:
1t47A Structure of fe2-hppd bound to ntbc (see paper)
28% identity, 29% coverage: 469:663/674 of query aligns to 162:359/362 of 1t47A
2r5vA Hydroxymandelate synthase crystal structure (see paper)
27% identity, 47% coverage: 336:652/674 of query aligns to 7:332/346 of 2r5vA
Sites not aligning to the query:
O52791 4-hydroxymandelate synthase; HMS; HmaS; 4-hydroxyphenylpyruvate dioxygenase II; EC 1.13.11.46 from Amycolatopsis orientalis (Nocardia orientalis) (see paper)
27% identity, 47% coverage: 336:652/674 of query aligns to 8:334/357 of O52791
8im3A Crystal structure of human hppd complexed with compound a10 (see paper)
26% identity, 47% coverage: 337:652/674 of query aligns to 16:357/371 of 8im3A
Sites not aligning to the query:
5ec3A Structural insight into the catalyitc mechanism of human 4- hydroxyphenylpyruvate dioxygenase
26% identity, 47% coverage: 337:652/674 of query aligns to 14:355/376 of 5ec3A
8im2A Crystal structure of human hppd complexed with ntbc (see paper)
26% identity, 47% coverage: 337:652/674 of query aligns to 16:357/374 of 8im2A
Sites not aligning to the query:
P32755 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase; F Alloantigen; F protein; EC 1.13.11.27 from Rattus norvegicus (Rat) (see 2 papers)
27% identity, 27% coverage: 469:652/674 of query aligns to 171:363/393 of P32755
Sites not aligning to the query:
1sqiA Structural basis for inhibitor selectivity revealed by crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases (see paper)
27% identity, 27% coverage: 469:652/674 of query aligns to 164:340/343 of 1sqiA
Sites not aligning to the query:
1sqiB Structural basis for inhibitor selectivity revealed by crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases (see paper)
27% identity, 27% coverage: 469:652/674 of query aligns to 165:339/342 of 1sqiB
Sites not aligning to the query:
7yvvA Acmp1, r-4-hydroxymandelate synthase
25% identity, 42% coverage: 380:662/674 of query aligns to 57:332/335 of 7yvvA
8jbwA Crystal structure of zthppd-(+)-usnic acid complex (see paper)
32% identity, 18% coverage: 545:663/674 of query aligns to 238:360/364 of 8jbwA
Sites not aligning to the query:
5ywhA Crystal structure of arabidopsis thaliana hppd complexed with y13508
25% identity, 37% coverage: 392:643/674 of query aligns to 96:346/372 of 5ywhA
Sites not aligning to the query:
>WP_051378279.1 NCBI__GCF_000482785.1:WP_051378279.1
MRRSIATVSISGALEDKMESIARARFDGFEVFENDLIHSALAPRQIGALAADLGLSIDLY
QPFRDFDAADDRLFRRNLDRAERKFDLMGELGATMILICSNVSPTAATDDAQIAGQLYEL
AERAAKRGIRLAYESLAWARHVWDYRHCWNIVRQADHPHLGVCLDSFHILSRGLDPKHIE
DIASEKIFFLQLADAPLMTMDVLQWSRHYRCFPGQGGFDLPKFLGHVLAAGYAGPLSLEI
FNDVFREAPSRDTTHDAMRSLLWLEEQVKLRAVEGLDVASAIGAAAPEAREADVPADAVV
AAPAAARSQATPLAAALGRLELFSPPAPPRIDGTAFVEFAVDDGTEAALGRVFSALGFER
AGEHRSKRVTLWRQGDTNLVINNEPGSFASEFFRQHGPSICAIALRTDDGQRAVNRATAF
HLPRFEGRVGPHETTIPAVRTVDGSILYFVSPELEARGFWDIDFRLAEPANRAIGLGRVD
HIAIAAPIESFDSAVLFQRAALGLEPGDSLELTDPYGMVRSRALSNADRSLRVALNVSQS
RSTVIARSVSSMHGAGVHHLAFDCADIFASVAAARGRGLAFLDIPDNYYDDLAARFDIDA
AVLDRLRMLRVLYDRDASGGEFLHAYTPMFEGRFFFELVQRIGGYDGYGASNAPVRMAAL
ARDTTSLVTPPRGV
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory