SitesBLAST
Comparing WP_051953709.1 NCBI__GCF_000746085.1:WP_051953709.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
5mr0D Thermophilic archaeal branched-chain amino acid transaminases from geoglobus acetivorans and archaeoglobus fulgidus: biochemical and structural characterisation (see paper)
33% identity, 87% coverage: 1:243/280 of query aligns to 1:246/290 of 5mr0D
- active site: F32 (= F32), G34 (≠ T34), K150 (= K146), E183 (≠ C179), L206 (= L203)
- binding 3-[o-phosphonopyridoxyl]--amino-benzoic acid: R51 (= R51), G100 (= G100), L101 (= L101), K150 (= K146), Y154 (= Y150), E183 (≠ C179), G186 (≠ I182), D187 (≠ A183), L206 (= L203), I209 (≠ A206), T210 (≠ M207), G245 (≠ N242), T246 (≠ S243)
5e25A Crystal structure of branched-chain aminotransferase from thermophilic archaea geoglobus acetivorans complexed with alpha-ketoglutarate (see paper)
31% identity, 90% coverage: 4:255/280 of query aligns to 5:259/290 of 5e25A
- active site: F33 (= F32), G35 (≠ T34), K151 (= K146), E184 (≠ C179), L207 (= L203)
- binding 2-oxoglutaric acid: Y88 (≠ I87), K151 (= K146), T247 (≠ S243), A248 (≠ V244)
- binding pyridoxal-5'-phosphate: R52 (= R51), K151 (= K146), Y155 (= Y150), E184 (≠ C179), G187 (≠ I182), D188 (≠ A183), L207 (= L203), G209 (= G205), I210 (≠ A206), T211 (≠ M207), G246 (≠ N242), T247 (≠ S243)
2y4rA Crystal structure of 4-amino-4-deoxychorismate lyase from pseudomonas aeruginosa (see paper)
34% identity, 83% coverage: 16:246/280 of query aligns to 10:239/270 of 2y4rA
- active site: F26 (= F32), T28 (= T34), K139 (= K146), E172 (≠ C179), V196 (≠ L203)
- binding pyridoxal-5'-phosphate: R45 (= R51), K139 (= K146), S176 (≠ A183), V196 (≠ L203), G198 (= G205), V199 (≠ A206), N235 (= N242), S236 (= S243)
7p3tB Transaminase of gamma-proteobacterium (see paper)
32% identity, 91% coverage: 5:259/280 of query aligns to 7:264/299 of 7p3tB
- binding pyridoxal-5'-phosphate: R53 (= R51), K153 (= K146), R157 (≠ Y150), E186 (≠ C179), S187 (≠ A180), A188 (≠ T181), A189 (≠ I182), S190 (≠ A183), G210 (= G205), I211 (≠ A206), T212 (≠ M207), T248 (≠ S243)
6thqB Crystal structure of branched-chain aminotransferase from thermophilic archaea thermoproteus uzoniensis with norvaline
30% identity, 100% coverage: 2:280/280 of query aligns to 7:281/301 of 6thqB
- active site: F37 (= F32), K156 (≠ I145), E190 (≠ C179), L214 (= L203)
- binding pyridoxal-5'-phosphate: R60 (= R51), K156 (≠ I145), Y161 (= Y150), E190 (≠ C179), N195 (= N184), L214 (= L203), G216 (= G205), I217 (≠ A206), T218 (≠ M207), T254 (≠ A247)
- binding 2-[o-phosphonopyridoxyl]-amino-pentanoic acid: R60 (= R51), Y97 (vs. gap), K156 (≠ I145), Y161 (= Y150), E190 (≠ C179), G193 (≠ I182), E194 (≠ A183), N195 (= N184), G216 (= G205), I217 (≠ A206), T218 (≠ M207), G253 (= G246), T254 (≠ A247), A255 (= A248)
7z79B Crystal structure of aminotransferase-like protein from variovorax paradoxus
30% identity, 91% coverage: 5:258/280 of query aligns to 19:277/306 of 7z79B
- binding pyridoxal-5'-phosphate: W46 (≠ F32), R65 (= R51), N166 (vs. gap), S202 (≠ I182), T203 (≠ A183), F222 (≠ L203), G224 (= G205), I225 (≠ A206), T226 (≠ M207), G261 (≠ N242), T262 (≠ S243)
5fr9A Structure of transaminase ata-117 arrmut11 from arthrobacter sp. Knk168 inhibited with 1-(4-bromophenyl)-2-fluoroethylamine (see paper)
27% identity, 90% coverage: 4:255/280 of query aligns to 28:284/319 of 5fr9A
- active site: Y56 (≠ F32), K177 (= K146), E210 (≠ C179), L232 (= L203)
- binding [4-[3-(4-bromophenyl)-3-oxidanylidene-propyl]-6-methyl-5-oxidanyl-pyridin-3-yl]methyl phosphate: R75 (= R51), K177 (= K146), E210 (≠ C179), G213 (≠ I182), F214 (≠ A183), L232 (= L203), G234 (= G205), I235 (≠ A206), T236 (≠ M207), T272 (≠ S243)
P19938 D-alanine aminotransferase; D-amino acid aminotransferase; D-amino acid transaminase; DAAT; D-aspartate aminotransferase; EC 2.6.1.21 from Bacillus sp. (strain YM-1) (see 5 papers)
23% identity, 98% coverage: 5:277/280 of query aligns to 6:277/283 of P19938
- Y32 (≠ F32) binding substrate
- R51 (= R51) binding pyridoxal 5'-phosphate
- R99 (= R99) binding substrate
- H101 (≠ L101) binding substrate
- K146 (= K146) active site, Proton acceptor; modified: N6-(pyridoxal phosphate)lysine
- E178 (≠ C179) binding pyridoxal 5'-phosphate; mutation to K: Loss of transaminase activity and small gain in racemase activity.
- L202 (= L203) mutation to A: Inactivates enzyme.
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
3lqsA Complex structure of d-amino acid aminotransferase and 4-amino-4,5- dihydro-thiophenecarboxylic acid (adta) (see paper)
23% identity, 98% coverage: 5:277/280 of query aligns to 5:276/280 of 3lqsA
- active site: Y31 (≠ F32), V33 (≠ T34), K145 (= K146), E177 (≠ C179), L201 (= L203)
- binding 4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]thiophene-2-carboxylic acid: V33 (≠ T34), R50 (= R51), E177 (≠ C179), S180 (≠ I182), S181 (≠ A183), N182 (= N184), L201 (= L203), G203 (= G205), I204 (≠ A206), T205 (≠ M207), S240 (≠ N242), T241 (≠ S243), T242 (≠ V244)
3daaA Crystallographic structure of d-amino acid aminotransferase inactivated by pyridoxyl-d-alanine (see paper)
23% identity, 98% coverage: 5:277/280 of query aligns to 5:276/277 of 3daaA
- active site: Y31 (≠ F32), V33 (≠ T34), K145 (= K146), E177 (≠ C179), L201 (= L203)
- binding n-(5'-phosphopyridoxyl)-d-alanine: Y31 (≠ F32), R50 (= R51), K145 (= K146), E177 (≠ C179), S180 (≠ I182), S181 (≠ A183), L201 (= L203), G203 (= G205), I204 (≠ A206), T205 (≠ M207), S240 (≠ N242), T241 (≠ S243)
2daaA Crystallographic structure of d-amino acid aminotransferase inactivated by d-cycloserine
23% identity, 98% coverage: 5:277/280 of query aligns to 5:276/277 of 2daaA
- active site: Y31 (≠ F32), V33 (≠ T34), K145 (= K146), E177 (≠ C179), L201 (= L203)
- binding d-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-n,o-cycloserylamide: Y31 (≠ F32), V33 (≠ T34), R50 (= R51), R98 (= R99), H100 (≠ L101), K145 (= K146), E177 (≠ C179), S180 (≠ I182), S181 (≠ A183), N182 (= N184), L201 (= L203), G203 (= G205), I204 (≠ A206), T205 (≠ M207), T241 (≠ S243)
1daaA Crystallographic structure of d-amino acid aminotransferase complexed with pyridoxal-5'-phosphate (see paper)
23% identity, 98% coverage: 5:277/280 of query aligns to 5:276/277 of 1daaA
- active site: Y31 (≠ F32), V33 (≠ T34), K145 (= K146), E177 (≠ C179), L201 (= L203)
- binding pyridoxal-5'-phosphate: R50 (= R51), K145 (= K146), E177 (≠ C179), S180 (≠ I182), S181 (≠ A183), L201 (= L203), G203 (= G205), I204 (≠ A206), T205 (≠ M207), S240 (≠ N242), T241 (≠ S243)
1i2lA Deoxychorismate lyase from escherichia coli with inhibitor
29% identity, 86% coverage: 14:253/280 of query aligns to 8:247/269 of 1i2lA
- active site: F26 (= F32), T28 (= T34), I139 (= I145), K140 (= K146), E173 (≠ C179), V197 (≠ L203)
- binding d-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-n,o-cycloserylamide: R45 (= R51), K140 (= K146), E173 (≠ C179), C175 (≠ T181), A176 (≠ I182), A177 (= A183), N178 (= N184), V197 (≠ L203), G199 (= G205), I200 (≠ A206), M201 (= M207), N236 (= N242), A237 (≠ S243)
1i2kA Aminodeoxychorismate lyase from escherichia coli
29% identity, 86% coverage: 14:253/280 of query aligns to 8:247/269 of 1i2kA
- active site: F26 (= F32), T28 (= T34), I139 (= I145), K140 (= K146), E173 (≠ C179), V197 (≠ L203)
- binding pyridoxal-5'-phosphate: R45 (= R51), K140 (= K146), E173 (≠ C179), A176 (≠ I182), A177 (= A183), V197 (≠ L203), G199 (= G205), I200 (≠ A206), M201 (= M207), N236 (= N242), A237 (≠ S243)
1a0gB L201a mutant of d-amino acid aminotransferase complexed with pyridoxamine-5'-phosphate (see paper)
23% identity, 98% coverage: 5:277/280 of query aligns to 5:276/282 of 1a0gB
- active site: Y31 (≠ F32), V33 (≠ T34), K145 (= K146), E177 (≠ C179), A201 (≠ L203)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: R50 (= R51), K145 (= K146), E177 (≠ C179), S180 (≠ I182), S181 (≠ A183), G203 (= G205), I204 (≠ A206), T205 (≠ M207), S240 (≠ N242), T241 (≠ S243)
1iyeA Crystal structure of eschelichia coli branched-chain amino acid aminotransferase (see paper)
24% identity, 98% coverage: 5:279/280 of query aligns to 6:295/304 of 1iyeA