Comparing WP_052666930.1 NCBI__GCF_000969705.1:WP_052666930.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 14 hits to proteins with known functional sites (download)
3dasA Structure of the pqq-bound form of aldose sugar dehydrogenase (adh) from streptomyces coelicolor
47% identity, 80% coverage: 72:382/387 of query aligns to 14:331/334 of 3dasA
3a9hA Crystal structure of pqq-dependent sugar dehydrogenase holo-form (see paper)
43% identity, 82% coverage: 64:382/387 of query aligns to 1:333/338 of 3a9hA
3a9gA Crystal structure of pqq-dependent sugar dehydrogenase apo-form (see paper)
43% identity, 82% coverage: 64:382/387 of query aligns to 1:333/338 of 3a9gA
2ismB Crystal structure of the putative oxidoreductase (glucose dehydrogenase) (ttha0570) from thermus theromophilus hb8
42% identity, 82% coverage: 67:382/387 of query aligns to 2:332/333 of 2ismB
7cdyA Crystal structure of glucose dehydrogenase
35% identity, 78% coverage: 69:369/387 of query aligns to 3:339/346 of 7cdyA
1cq1A Soluble quinoprotein glucose dehydrogenase from acinetobacter calcoaceticus in complex with pqqh2 and glucose (see paper)
34% identity, 58% coverage: 51:274/387 of query aligns to 6:264/444 of 1cq1A
Sites not aligning to the query:
1c9uA Crystal structure of the soluble quinoprotein glucose dehydrogenase in complex with pqq (see paper)
34% identity, 58% coverage: 51:274/387 of query aligns to 6:264/444 of 1c9uA
Sites not aligning to the query:
1cruA Soluble quinoprotein glucose dehydrogenase from acinetobacter calcoaceticus in complex with pqq and methylhydrazine (see paper)
34% identity, 58% coverage: 51:274/387 of query aligns to 6:268/448 of 1cruA
Sites not aligning to the query:
P13650 Quinoprotein glucose dehydrogenase B; Glucose dehydrogenase B [pyrroloquinoline-quinone]; Soluble glucose dehydrogenase; s-GDH; EC 1.1.5.2 from Acinetobacter calcoaceticus (see paper)
32% identity, 69% coverage: 7:274/387 of query aligns to 9:294/478 of P13650
Sites not aligning to the query:
5minB Apo form of the soluble pqq-dependent glucose dehydrogenase from acinetobacter calcoaceticus
33% identity, 58% coverage: 51:274/387 of query aligns to 6:270/453 of 5minB
Sites not aligning to the query:
8re0A Quinoprotein glucose dehydrogenase B (see paper)
33% identity, 58% coverage: 51:274/387 of query aligns to 6:270/452 of 8re0A
Sites not aligning to the query:
7cgzA Glucose dehydrogenase
34% identity, 78% coverage: 69:369/387 of query aligns to 3:314/321 of 7cgzA
P75804 Aldose sugar dehydrogenase YliI; Asd; Soluble aldose sugar dehydrogenase YliI; EC 1.1.5.- from Escherichia coli (strain K12) (see paper)
32% identity, 80% coverage: 66:374/387 of query aligns to 24:371/371 of P75804
2g8sA Crystal structure of the soluble aldose sugar dehydrogenase (asd) from escherichia coli in the apo-form (see paper)
32% identity, 80% coverage: 66:373/387 of query aligns to 2:348/348 of 2g8sA
>WP_052666930.1 NCBI__GCF_000969705.1:WP_052666930.1
MRTRSILALLTAAALVAACAADDDPDLPAAPPEDAPDEVPDDTEPAPDEDPDDDADAVDE
QPDEVTVAVTDVATDLDAPWDVAWLGDRVLLTERDSGRLLELADDGSTREVRTFEVDSTG
EGGLLGIAAGPDDLLYVYLTTSSDNRVVRLDPDADAEPEVVLDGIPAAATHNGGRIAFGP
DGMLYVATGDAQDQPAAQDPDSLAGKILRVTPGGGVPDDNPTGDEVWSLGHRNVQGLAFD
TDGRLFAPEFGPDVDDEINLIEPGANYGWPEVTGEAGVEGFTDPLLVRQPAEASWSGGAV
LVDGAIPQWEGDLFVAALRGERLWRVPLADGALDGEPEELYVGEHGRLREVMQAPDGSLW
VLTNNRDGRGSPRDGDDRILRIGPASG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory