Comparing WP_052667228.1 NCBI__GCF_000969705.1:WP_052667228.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8k2vG 3-methylcrotonyl-coa carboxylase in mccd state with acetyl coa
64% identity, 99% coverage: 9:534/534 of query aligns to 14:541/541 of 8k2vG
8j4zJ Human 3-methylcrotonyl-coa carboxylase in bccp-cts state with substrate
64% identity, 99% coverage: 9:534/534 of query aligns to 14:541/541 of 8j4zJ
3u9sF Crystal structure of p. Aeruginosa 3-methylcrotonyl-coa carboxylase (mcc) 750 kd holoenzyme, coa complex (see paper)
63% identity, 100% coverage: 1:534/534 of query aligns to 3:537/537 of 3u9sF
8jxmC Human 3-methylcrotonyl-coa carboxylase in bccp-h2 state with mcoa
61% identity, 99% coverage: 9:534/534 of query aligns to 14:520/520 of 8jxmC
8rthF Trypanosoma brucei 3-methylcrotonyl-coa carboxylase (see paper)
59% identity, 97% coverage: 4:523/534 of query aligns to 22:542/542 of 8rthF
8f3dA 3-methylcrotonyl-coa carboxylase in filament, beta-subunit centered (see paper)
57% identity, 97% coverage: 4:523/534 of query aligns to 19:566/566 of 8f3dA
1vrgA Crystal structure of propionyl-coa carboxylase, beta subunit (tm0716) from thermotoga maritima at 2.30 a resolution
34% identity, 92% coverage: 28:516/534 of query aligns to 9:495/515 of 1vrgA
1on3E Transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) (see paper)
35% identity, 92% coverage: 28:516/534 of query aligns to 15:500/520 of 1on3E
3ib9A Propionyl-coa carboxylase beta subunit, d422l (see paper)
34% identity, 93% coverage: 27:520/534 of query aligns to 10:505/521 of 3ib9A
1xnyA Biotin and propionyl-coa bound to acyl-coa carboxylase beta subunit from s. Coelicolor (pccb) (see paper)
34% identity, 93% coverage: 27:520/534 of query aligns to 10:505/521 of 1xnyA
1on3C Transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) (see paper)
34% identity, 92% coverage: 28:516/534 of query aligns to 11:490/510 of 1on3C
8pn7A Engineered glycolyl-coa carboxylase (g20r variant) with bound coa (see paper)
34% identity, 94% coverage: 28:528/534 of query aligns to 3:498/506 of 8pn7A
Q168G2 Propionyl-CoA carboxylase beta chain; EC 6.4.1.3 from Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) (see paper)
33% identity, 95% coverage: 23:527/534 of query aligns to 2:501/510 of Q168G2
3n6rB Crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) (see paper)
33% identity, 94% coverage: 28:527/534 of query aligns to 3:497/506 of 3n6rB
7ybuP Human propionyl-coenzyme a carboxylase
33% identity, 93% coverage: 29:527/534 of query aligns to 7:498/507 of 7ybuP
8sgxE Leishmania tarentolae propionyl-coa carboxylase (alpha-4-beta-6) (see paper)
32% identity, 87% coverage: 47:509/534 of query aligns to 8:462/489 of 8sgxE
5iniF Structural basis for acyl-coa carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics (see paper)
30% identity, 93% coverage: 27:521/534 of query aligns to 7:496/511 of 5iniF
3gf3A Glutaconyl-coa decarboxylase a subunit from clostridium symbiosum co- crystallized with glutaconyl-coa (see paper)
27% identity, 95% coverage: 18:523/534 of query aligns to 25:541/563 of 3gf3A
3gmaB Glutaconyl-coa decarboxylase a subunit from clostridium symbiosum co- crystallized with glutaryl-coa (see paper)
27% identity, 95% coverage: 18:523/534 of query aligns to 25:545/566 of 3gmaB
4g2rB Crystal structure of the carboxyltransferase subunit of acc (accd6) in complex with inhibitor haloxyfop from mycobacterium tuberculosis (see paper)
29% identity, 85% coverage: 65:519/534 of query aligns to 1:436/441 of 4g2rB
>WP_052667228.1 NCBI__GCF_000969705.1:WP_052667228.1
MDRLQSTVDPTSPAFAANEAHHRALAAELHERAATAALGGSPRSRERHVSRGKLLPRDRV
EGLLDPGTPFLELSPLAMGGMEDDEAPGAGIITGVGRVSGRTCVIVANDATVKGGTYYPL
TVKKHLRAQEVARDNRLPCIYLVDSGGAFLPKQDEVFPDRDHFGRIFYNQATLSGMGLPQ
IAVVMGSCTAGGAYVPAMSDETIIVREQGTIFLGGPPLVKAATGEVVSAEDLGGGDLHAR
TSGVVDHLAIDDRHALQLARDAIATCPAPTLPAPSAEVEPPAYDPAELYGLQPTDLRQPV
AAREIIARIVDGSRFHEFKPLYGETLVTGFARIHGHEVGIVANDGILFSASALKGAHFVE
LCNQRQVPLIFLQNITGFMVGREYEAGGIAKDGAKMVTAVACSTVPKLTVVTGGSFGAGN
YAMCGRAYSPRFLWTWPNARISVMGGEQAANVLATVRRDGIEARGEHWSTEDEEAFKAPI
RDQYEHQGNPYYATARLWDDGVIDPVETRDVLAMGLAAARHAPVEPPRYGVFRM
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory