Comparing WP_052667449.1 NCBI__GCF_000969705.1:WP_052667449.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
A0A0H2ZQB9 Ergothioneine transporter EgtUBC from Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) (see paper)
40% identity, 64% coverage: 74:220/230 of query aligns to 59:204/506 of A0A0H2ZQB9
Sites not aligning to the query:
B5Z7I3 Ergothioneine transport permease/ergothioneine binding protein EgtU from Helicobacter pylori (strain G27) (see paper)
37% identity, 41% coverage: 74:167/230 of query aligns to 97:190/553 of B5Z7I3
Sites not aligning to the query:
8wm8B Cryo-em structure of cyanobacterial nitrate/nitrite transporter nrtbcd in complex with nitrate (see paper)
26% identity, 62% coverage: 78:219/230 of query aligns to 115:252/265 of 8wm8B
>WP_052667449.1 NCBI__GCF_000969705.1:WP_052667449.1
MSLEILTTWLWLAQDGVPAGEWLSRNTDAIVRRGVEHLQLTGMSIGFGLAISIVLAIIAM
RYRWAYRPITMATGIVFTIPSIALFPILRPYFGLTTTTAVVGLTLYTLLFLFRNIIVGLE
GVPADVVEAAEGQGYERNRLFLEVQLPLALPVIIAGIRIATVTTIGLVTITGLIGYGGFG
FFIFDGLRSNLYLPKLLVGALAPMALALIADALLLLLERALTPWSRRSAA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory