SitesBLAST
Comparing WP_053768266.1 NCBI__GCF_001280255.1:WP_053768266.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 6 hits to proteins with known functional sites (download)
A0RV30 Fructose-1,6-bisphosphate aldolase/phosphatase; FBP A/P; FBP aldolase/phosphatase; EC 3.1.3.11; EC 4.1.2.13 from Cenarchaeum symbiosum (strain A) (see 2 papers)
54% identity, 100% coverage: 1:362/363 of query aligns to 1:357/376 of A0RV30
- Y224 (= Y230) mutation to F: Shows slightly decreased FBP phosphatase activity, whereas FBP aldolase activity is nearly completely abolished.
- K227 (= K233) active site, Schiff-base intermediate with DHAP; for FBP aldolase activity; mutation to R: Shows enhanced FBP phosphatase activity, whereas FBP aldolase activity is completely abolished.
- D228 (= D234) mutation to N: Shows completely abolition of both FBP aldolase and FBP phosphatase activities.
- E341 (= E347) mutation to Q: Shows unaltered FBP aldolase activity, whereas FBP phosphatase activity is completely abolished.
- Y342 (= Y348) mutation to F: Shows unaltered FBP aldolase activity, whereas FBP phosphatase activity is completely abolished.
F9VMT6 Fructose-1,6-bisphosphate aldolase/phosphatase; FBP A/P; FBP aldolase/phosphatase; Fructose-1,6-bisphosphatase; FBPase; EC 3.1.3.11; EC 4.1.2.13 from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (Sulfolobus tokodaii) (see 2 papers)
47% identity, 100% coverage: 1:363/363 of query aligns to 1:362/384 of F9VMT6
- D11 (= D11) binding Mg(2+); mutation to A: 930-fold decrease in FBPase catalytic efficiency.
- H18 (= H18) binding in other chain; binding dihydroxyacetone phosphate; binding Mg(2+); mutation to A: 1.7-fold increase in FBPase catalytic activity and 5-fold decrease in FBP affinity, leading to a 2.7-fold decrease in FBPase catalytic efficiency.
- D52 (= D51) binding Mg(2+); binding Mg(2+); mutation to A: 175-fold decrease in FBPase catalytic efficiency.
- D53 (= D52) binding Mg(2+); mutation to A: 1000-fold decrease in FBPase catalytic activity.
- Y90 (= Y89) binding in other chain
- Q94 (= Q93) binding Mg(2+); mutation to A: 1.3-fold increase in FBPase catalytic efficiency.
- GN 103:104 (= GN 102:103) binding in other chain
- D131 (= D130) binding Mg(2+); mutation to A: 2-fold increase in FBP affinity and 10-fold decrease in FBPase catalytic activity, leading to a 5.5-fold decrease in FBPase catalytic efficiency.
- K132 (= K131) binding in other chain; binding dihydroxyacetone phosphate
- Y228 (= Y230) mutation to F: Retains the FBPase activity, but loses the FBP aldolase activity.
- K231 (= K233) active site, Schiff-base intermediate with DHAP; for FBP aldolase activity; binding Mg(2+)
- D232 (= D234) binding Mg(2+); binding Mg(2+); mutation to A: 275-fold decrease in FBPase catalytic activity.
- D233 (= D235) binding Mg(2+); binding Mg(2+); mutation to A: 2000-fold decrease in FBPase catalytic activity.
- QH 241:242 (≠ QK 243:244) binding beta-D-fructose 1,6-bisphosphate
- R265 (= R267) binding in other chain; binding dihydroxyacetone phosphate
- D286 (≠ F287) binding in other chain; binding dihydroxyacetone phosphate
- Y347 (= Y348) binding in other chain
3t2dA Fructose-1,6-bisphosphate aldolase/phosphatase from thermoproteus neutrophilus, fbp-bound form (see paper)
48% identity, 99% coverage: 1:359/363 of query aligns to 1:369/390 of 3t2dA
- binding magnesium ion: D11 (= D11), H18 (= H18), D52 (= D51), D52 (= D51), D53 (= D52), Q95 (= Q93), D132 (= D130), D233 (= D234), D234 (= D235), D234 (= D235)
- binding 1,6-di-O-phosphono-D-fructose: H18 (= H18), D52 (= D51), Y91 (= Y89), Q95 (= Q93), S103 (≠ T101), G104 (= G102), N105 (= N103), K133 (= K131), D233 (= D234), D234 (= D235), M265 (≠ T266), R266 (= R267), D297 (vs. gap), Y358 (= Y348)
B1YAL1 Fructose-1,6-bisphosphate aldolase/phosphatase; FBP A/P; FBP aldolase/phosphatase; EC 3.1.3.11; EC 4.1.2.13 from Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / NBRC 100436 / V24Sta) (Thermoproteus neutrophilus) (see paper)
48% identity, 99% coverage: 1:359/363 of query aligns to 1:369/399 of B1YAL1
- D11 (= D11) binding Mg(2+)
- H18 (= H18) binding in other chain; binding dihydroxyacetone phosphate; binding Mg(2+)
- D52 (= D51) binding Mg(2+); binding Mg(2+)
- D53 (= D52) binding Mg(2+)
- Y91 (= Y89) binding in other chain
- Q95 (= Q93) binding Mg(2+)
- GN 104:105 (= GN 102:103) binding in other chain
- D132 (= D130) binding Mg(2+)
- K133 (= K131) binding in other chain; binding dihydroxyacetone phosphate
- Y229 (= Y230) mutation to F: Shows unaltered FBP phosphatase activity, whereas FBP aldolase activity is completely abolished.
- K232 (= K233) active site, Schiff-base intermediate with DHAP; for FBP aldolase activity
- D233 (= D234) binding Mg(2+); binding Mg(2+)
- D234 (= D235) binding Mg(2+); binding Mg(2+)
- QS 242:243 (≠ QK 243:244) binding beta-D-fructose 1,6-bisphosphate
- R266 (= R267) binding in other chain; binding dihydroxyacetone phosphate
- D297 (vs. gap) binding in other chain; binding dihydroxyacetone phosphate; mutation to N: 18-fold decrease in FBP phosphatase activity, whereas FBP aldolase activity is completely abolished.
- Y358 (= Y348) binding in other chain
1umgA Crystal structure of fructose-1,6-bisphosphatase (see paper)
46% identity, 100% coverage: 2:363/363 of query aligns to 1:358/359 of 1umgA
- binding 1,6-fructose diphosphate (linear form): H17 (= H18), D51 (= D51), Y89 (= Y89), Q93 (= Q93), S101 (≠ T101), G102 (= G102), N103 (= N103), K131 (= K131), D228 (= D234), D229 (= D235), M260 (≠ T266), R261 (= R267), D282 (≠ F287), Y343 (= Y348)
- binding magnesium ion: D10 (= D11), H17 (= H18), D51 (= D51), D51 (= D51), D52 (= D52), Q93 (= Q93), D130 (= D130), D228 (= D234), D229 (= D235), D229 (= D235)
3t2eA Fructose-1,6-bisphosphate aldolase/phosphatase from thermoproteus neutrophilus, f6p-bound form (see paper)
47% identity, 99% coverage: 1:359/363 of query aligns to 1:365/385 of 3t2eA
- binding fructose -6-phosphate: H18 (= H18), Y91 (= Y89), M261 (≠ T266), R262 (= R267), D293 (vs. gap), Y354 (= Y348)
- binding magnesium ion: D11 (= D11), H18 (= H18), D52 (= D51), D52 (= D51), D53 (= D52), Q95 (= Q93), D132 (= D130), D230 (= D235)
Query Sequence
>WP_053768266.1 NCBI__GCF_001280255.1:WP_053768266.1
MRITLSVLKADIGSVGGHTLPSPAVLAAVKEVVEEAKGSLLLDAYVFHIGDDIVLLLSHT
QGVAHPAIHELAWKAFREGTEVAKREGLYGAGQDLLKDAFTGNLHGLGPQVAEMEFAERP
SEPFMVLAADKTEPGAFNLPLYLAFADPMYSSGLLLSPELRPGFRFRIMDLAQTERDSYI
ELDAPERLYDIAALLRDSHRFAIASIWLRKYGEVAAVVSTTRLRNIAGRYVGKDDPVALV
RTQKIFPATEEFGPPFALAPFVAGDTRGSHHLPLMPVKANTPASTFFCVPMVCALGFSLK
EGRLTGPVDLFADPVWDAVRAKVVEKAQEMRRQGFYGPAMLPMEELEYTGIAERLKELER
EFS
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory