Comparing WP_053938627.1 NCBI__GCF_001294205.1:WP_053938627.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 7 hits to proteins with known functional sites (download)
7d50B Spua mutant - h221n with glutamyl-thioester (see paper)
58% identity, 95% coverage: 7:258/265 of query aligns to 5:255/255 of 7d50B
7d53A Spua mutant - h221n with glu (see paper)
58% identity, 93% coverage: 12:258/265 of query aligns to 4:249/249 of 7d53A
7d4rB Spua native structure (see paper)
50% identity, 92% coverage: 12:254/265 of query aligns to 2:213/215 of 7d4rB
6vtvB Crystal structure of puud gamma-glutamyl-gamma-aminobutyrate hydrolase from e. Coli
42% identity, 91% coverage: 10:251/265 of query aligns to 4:242/252 of 6vtvB
P76038 Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD; Gamma-Glu-GABA hydrolase; EC 3.5.1.94 from Escherichia coli (strain K12) (see paper)
42% identity, 91% coverage: 10:251/265 of query aligns to 6:244/254 of P76038
3fijA Crystal structure of a uncharacterized protein lin1909
36% identity, 81% coverage: 33:247/265 of query aligns to 11:216/224 of 3fijA
O33341 Putative glutamine amidotransferase Rv2859c; EC 2.4.2.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
34% identity, 97% coverage: 6:261/265 of query aligns to 60:304/308 of O33341
>WP_053938627.1 NCBI__GCF_001294205.1:WP_053938627.1
MQAQVPSSRSAPVVGVIADLKQIGAHGFHAAGHKYIAAVVGGAHAFAVVLPVLAPQQDIA
QTLDLVDGLLLTGSYSNVEPHHYAGPASAPGTLHDPDRDANSLPLINAAIAAGVPLLGIC
RGFQEMNVALGGSLHQRVHEVAGMLLHKERDEDPLDTQYGPAHPVSVVAGGQLAGWLDGA
SQITVNSLHSQGVQTLALRARAEAIAPDGLVEAFSVPEASRFAFAVQWHPEWRYADNPVS
LALFAAFGEACAARRAARLSQPVTA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory