Comparing WP_053939460.1 NCBI__GCF_001294205.1:WP_053939460.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 13 hits to proteins with known functional sites (download)
7pldB Caulobacter crescentus xylonolactonase with (r)-4-hydroxy-2- pyrrolidone (see paper)
37% identity, 92% coverage: 19:295/301 of query aligns to 14:284/289 of 7pldB
7plbB Caulobacter crescentus xylonolactonase with d-xylose (see paper)
37% identity, 92% coverage: 19:295/301 of query aligns to 14:284/289 of 7plbB
Q9A9Z1 D-xylonolactone lactonase; Xylono-1,5-lactonase; EC 3.1.1.110 from Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) (Caulobacter crescentus) (see paper)
37% identity, 92% coverage: 19:295/301 of query aligns to 14:284/289 of Q9A9Z1
4gnaA Mouse smp30/gnl-xylitol complex (see paper)
33% identity, 66% coverage: 95:292/301 of query aligns to 88:290/297 of 4gnaA
Sites not aligning to the query:
4gn9A Mouse smp30/gnl-glucose complex (see paper)
33% identity, 66% coverage: 95:292/301 of query aligns to 88:290/297 of 4gn9A
Sites not aligning to the query:
4gn8A Mouse smp30/gnl-1,5-ag complex (see paper)
33% identity, 66% coverage: 95:292/301 of query aligns to 88:290/297 of 4gn8A
Sites not aligning to the query:
4gn7A Mouse smp30/gnl (see paper)
33% identity, 66% coverage: 95:292/301 of query aligns to 88:290/297 of 4gn7A
Sites not aligning to the query:
3g4hA Crystal structure of human senescence marker protein-30 (zinc bound) (see paper)
30% identity, 87% coverage: 30:292/301 of query aligns to 24:290/297 of 3g4hA
Sites not aligning to the query:
Q15493 Regucalcin; RC; Gluconolactonase; GNL; Senescence marker protein 30; SMP-30; EC 3.1.1.17 from Homo sapiens (Human) (see 2 papers)
31% identity, 87% coverage: 30:292/301 of query aligns to 26:292/299 of Q15493
Sites not aligning to the query:
4gncA Human smp30/gnl-1,5-ag complex (see paper)
30% identity, 87% coverage: 30:292/301 of query aligns to 25:291/298 of 4gncA
Sites not aligning to the query:
5gx1A Luciferin-regenerating enzyme collected with serial synchrotron rotational crystallography with accumulated dose of 1.1 mgy (1st measurement) (see paper)
28% identity, 76% coverage: 65:292/301 of query aligns to 70:300/307 of 5gx1A
Sites not aligning to the query:
5d9bA Luciferin-regenerating enzyme solved by siras using xfel (refined against native data) (see paper)
28% identity, 76% coverage: 65:292/301 of query aligns to 70:300/307 of 5d9bA
Sites not aligning to the query:
3dr2A Structural and functional analyses of xc5397 from xanthomonas campestris: a gluconolactonase important in glucose secondary metabolic pathways (see paper)
34% identity, 42% coverage: 135:261/301 of query aligns to 169:288/299 of 3dr2A
Sites not aligning to the query:
>WP_053939460.1 NCBI__GCF_001294205.1:WP_053939460.1
MNTPINHHALQSLSAGQYNLAEGIIQHPQSGLLWWTNIHAKELWQLDLRTGQHRYWSTPQ
RVCCFAFTQDDDVLLVAFDAGLALFNTASGAIKRLTPVEPETPGTRCNDGRVDRAGNLVF
GTMHERSAEAKGHFYRFDTESRLQQLALPAIAISNSLAFSPDGGTLYWCDSLQHKIMQCA
YDSVTGAIAEISVFHDLGDTVIEPDGSTVDAAGYLWNAEWAGHCVTRYAPDGSIDRKIHL
PVAQPTCVTFGGPEQNTLFITSARAGLDDAALAQQPEAGSVFALEIPGVRGLPENIWLGE
V
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory