SitesBLAST
Comparing WP_054559090.1 NCBI__GCF_001306415.1:WP_054559090.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 13 hits to proteins with known functional sites (download)
Q28615 Solute carrier family 13 member 2; Na(+)/dicarboxylate cotransporter 1; NaDC-1; Renal sodium/dicarboxylate cotransporter from Oryctolagus cuniculus (Rabbit) (see paper)
35% identity, 89% coverage: 41:466/476 of query aligns to 45:556/593 of Q28615
- L83 (≠ G79) mutation to C: Decreases cell membrane expression. Decreases succinate transport activity. Decreases Km value for succinate.
- T86 (≠ I82) mutation to C: Does not affect cell membrane localization. Decreases succinate transport activity.
- Y228 (≠ F179) mutation to C: Does not affect cell membrane localization. Decreases succinate transport activity.
- Y432 (≠ L343) mutation to C: Does not affect cell membrane localization. Decreases succinate transport activity. Decreases Km value for succinate. More sensitive to inhibition by lithium.
- T474 (= T384) mutation to C: Does not affect cell membrane localization. Abolishes succinate transport activity.
- N525 (= N435) mutation to C: Decreases cell membrane expression. Decreases succinate transport activity.
- M539 (= M449) mutation to C: Does not affect cell membrane localization. Decreases succinate transport activity. Insensitive to inhibition by lithium.
8w6cA Cryoem structure of nadc1 with citrate (see paper)
37% identity, 88% coverage: 41:461/476 of query aligns to 45:500/530 of 8w6cA
- binding sodium ion: S136 (= S132), I139 (= I135), S140 (= S136), N141 (= N137), G191 (= G191), T423 (= T384), T426 (≠ M387), S427 (= S388), N428 (= N389), A470 (= A431)
- binding cholesterol hemisuccinate: I65 (≠ L61), M69 (≠ L65)
Sites not aligning to the query:
8w6gA Nadc1 with inhibitor aca (see paper)
37% identity, 88% coverage: 41:461/476 of query aligns to 45:497/527 of 8w6gA
Sites not aligning to the query:
7jsjA Structure of the nact-pf2 complex (see paper)
37% identity, 88% coverage: 41:461/476 of query aligns to 33:443/468 of 7jsjA
- binding sodium ion: S124 (= S132), I127 (= I135), S128 (= S136), N129 (= N137), G172 (= G191), T366 (= T384), T369 (≠ M387), S370 (= S388), N371 (= N389), A413 (= A431), T414 (= T432)
- binding (2R)-2-[2-(4-tert-butylphenyl)ethyl]-2-hydroxybutanedioic acid: N129 (= N137), T130 (= T138), T173 (= T192), G315 (= G334), I316 (= I335), N371 (= N389)
8w6nA Nas1 with sulfate in in/out state (see paper)
33% identity, 90% coverage: 45:473/476 of query aligns to 45:480/494 of 8w6nA
8w6nB Nas1 with sulfate in in/out state (see paper)
34% identity, 90% coverage: 45:473/476 of query aligns to 41:468/481 of 8w6nB
Q86YT5 Na(+)/citrate cotransporter; NaCT; Sodium-coupled citrate transporter; Sodium-dependent citrate transporter; Solute carrier family 13 member 5 from Homo sapiens (Human) (see 5 papers)
34% identity, 88% coverage: 41:461/476 of query aligns to 45:537/568 of Q86YT5
- T142 (= T138) to M: in DEE25; no loss of localization to plasma membrane; loss of function in citrate transport; dbSNP:rs761917087
- G219 (= G184) to E: loss of localization to plasma membrane; loss of function in citrate transport; dbSNP:rs150024888; to R: in DEE25; loss of function in citrate transport; loss of localization to plasma membrane; dbSNP:rs144332569
- T227 (= T192) to M: in DEE25; loss of function in citrate transport; no effect on localization to plasma membrane; dbSNP:rs587777577
- D243 (≠ N204) to N: no effect on localization to plasma membrane; no effect on its function in citrate transport; dbSNP:rs142262032
- G409 (= G334) mutation to Q: No effect on its function in citrate transport.
- I410 (= I335) mutation I->A,F: Significant loss of function in citrate transport.; mutation to V: No effect on its function in citrate transport.
- L420 (= L345) to P: loss of localization to plasma membrane; loss of function in citrate transport; dbSNP:rs150738356
- S427 (= S352) to L: in DEE25; loss of localization to plasma membrane; loss of function in citrate transport; dbSNP:rs548065551
- L485 (≠ I409) to R: no effect on localization to plasma membrane; reduced function in citrate transport; increased Km and Vmax values compared with that of wild type with citrate as substrate; dbSNP:rs148049520
- L488 (= L412) to P: in DEE25; loss of function in citrate transport; loss of localization to plasma membrane; dbSNP:rs587777578
- D524 (≠ Q448) to H: in DEE25; loss of function in citrate transport; no effect on localization to plasma membrane; dbSNP:rs863225448
Sites not aligning to the query:
- 341:568 natural variant: Missing (in DEE25; loss of localization to plasma membrane; loss of function in citrate transport)
- 562 modified: carbohydrate, N-linked (GlcNAc...) asparagine
6okzB Structure of vcindy bound to fumarate
36% identity, 89% coverage: 39:464/476 of query aligns to 35:435/444 of 6okzB
7t9gA Structure of vcindy-na+ (see paper)
36% identity, 89% coverage: 39:464/476 of query aligns to 36:436/445 of 7t9gA
6wtxA Structure of vcindy in complex with terephthalate (see paper)
36% identity, 89% coverage: 39:464/476 of query aligns to 36:436/445 of 6wtxA