Comparing WP_055435532.1 NCBI__GCF_001418085.1:WP_055435532.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2ordA Crystal structure of acetylornithine aminotransferase (ec 2.6.1.11) (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution
36% identity, 94% coverage: 23:391/394 of query aligns to 24:393/393 of 2ordA
Q9X2A5 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
36% identity, 94% coverage: 23:391/394 of query aligns to 16:385/385 of Q9X2A5
A0QYS9 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
38% identity, 91% coverage: 19:377/394 of query aligns to 20:372/390 of A0QYS9
8ht4B Crystal structure of acetylornithine aminotransferase complex with plp from corynebacterium glutamicum (see paper)
35% identity, 94% coverage: 19:388/394 of query aligns to 19:389/390 of 8ht4B
4uoxA Crystal structure of ygjg in complex with pyridoxal-5'-phosphate and putrescine (see paper)
37% identity, 94% coverage: 18:387/394 of query aligns to 59:438/453 of 4uoxA
Sites not aligning to the query:
P42588 Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli (strain K12) (see paper)
37% identity, 94% coverage: 18:387/394 of query aligns to 65:444/459 of P42588
8r2pD Yzwideal x16 a scaffold for cryo-em of small proteins of interest crystallizing in space group 19 (p 21 21 21)
37% identity, 94% coverage: 18:387/394 of query aligns to 58:437/507 of 8r2pD
Q5SHH5 [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
37% identity, 91% coverage: 21:377/394 of query aligns to 31:383/395 of Q5SHH5
1wkhA Acetylornithine aminotransferase from thermus thermophilus hb8
37% identity, 91% coverage: 21:377/394 of query aligns to 23:375/387 of 1wkhA
Sites not aligning to the query:
1wkgA Acetylornithine aminotransferase from thermus thermophilus hb8
37% identity, 91% coverage: 21:377/394 of query aligns to 23:375/387 of 1wkgA
Sites not aligning to the query:
1vefA Acetylornithine aminotransferase from thermus thermophilus hb8
37% identity, 91% coverage: 21:377/394 of query aligns to 23:375/387 of 1vefA
Sites not aligning to the query:
O66442 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Aquifex aeolicus (strain VF5)
34% identity, 94% coverage: 17:388/394 of query aligns to 11:376/376 of O66442
2eh6A Crystal structure of acetylornithine aminotransferase from aquifex aeolicus vf5
34% identity, 94% coverage: 17:388/394 of query aligns to 10:375/375 of 2eh6A
P9WPZ7 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
37% identity, 91% coverage: 19:377/394 of query aligns to 28:382/400 of P9WPZ7
Sites not aligning to the query:
7nncC Crystal structure of mycobacterium tuberculosis argd with prosthetic group pyridoxal-5'-phosphate and 6-methoxyquinoline-3-carboxylic acid
37% identity, 91% coverage: 19:377/394 of query aligns to 22:376/391 of 7nncC
7nn4A Crystal structure of mycobacterium tuberculosis argd with prosthetic group pyridoxal 5'-phosphate and 3-hydroxy-2-naphthoic acid.
37% identity, 91% coverage: 19:377/394 of query aligns to 22:376/391 of 7nn4A
Sites not aligning to the query:
Q9M8M7 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
32% identity, 94% coverage: 21:392/394 of query aligns to 80:457/457 of Q9M8M7
Sites not aligning to the query:
3nx3A Crystal structure of acetylornithine aminotransferase (argd) from campylobacter jejuni
33% identity, 91% coverage: 21:377/394 of query aligns to 15:374/388 of 3nx3A
P73133 Acetylornithine aminotransferase; ACOAT; EC 2.6.1.11 from Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) (see paper)
33% identity, 98% coverage: 4:391/394 of query aligns to 30:428/429 of P73133
4addA Structural and functional study of succinyl-ornithine transaminase from e. Coli (see paper)
32% identity, 90% coverage: 25:380/394 of query aligns to 27:387/400 of 4addA
Sites not aligning to the query:
>WP_055435532.1 NCBI__GCF_001418085.1:WP_055435532.1
MKDDFFKYQAQTTPHPLAMEISHAKGSYIYDTNNKVYLDFVAGVSACPLGHSHPRVVSAI
KTQIDKYLHVMVYGEYIQKPAVDLCELLAKNLPFPLEKTYLVNSGTEAIEGALKLARRAT
GRSEIIAAHSAYHGNTMGSLSLMDFEERKAPFRPLLPEISHITFNNEAHLKHITTKTACV
ILETIQGGAGFIEPKNDYLQKVRERCNDVGALLILDEIQPGIGRTGKLFGFENYNCIPDI
LVTGKGLGGGLPIGAFTASTKLMETLQDNPKLGHITTFGGNPVIASAALATLQEITESDL
MSQTLEKEKLIRSHLKHPLINEIRGKGLMLAAILPSAEIVNQLILKSQDNGLILFWLLFE
PKAIRITPPLTISNEEIIKGCGIIVEVLNNIQIR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory