Comparing WP_055435882.1 NCBI__GCF_001418085.1:WP_055435882.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8k1pB Mycobacterial efflux pump, adp+vanadate bound state
34% identity, 69% coverage: 5:216/308 of query aligns to 4:213/213 of 8k1pB
8k1oB Mycobacterial efflux pump, amppnp bound state
34% identity, 69% coverage: 5:216/308 of query aligns to 6:215/215 of 8k1oB
Q8IUA7 ATP-binding cassette sub-family A member 9; EC 7.6.2.- from Homo sapiens (Human) (see 2 papers)
33% identity, 67% coverage: 19:223/308 of query aligns to 1308:1512/1624 of Q8IUA7
Sites not aligning to the query:
4yerA Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
31% identity, 72% coverage: 1:221/308 of query aligns to 1:225/285 of 4yerA
Q8N139 ATP-binding cassette sub-family A member 6; EC 7.6.2.- from Homo sapiens (Human) (see 2 papers)
33% identity, 66% coverage: 19:222/308 of query aligns to 1302:1503/1617 of Q8N139
Sites not aligning to the query:
E9Q876 Glucosylceramide transporter ABCA12; ATP-binding cassette sub-family A member 12; EC 7.6.2.1 from Mus musculus (Mouse) (see 2 papers)
29% identity, 67% coverage: 19:223/308 of query aligns to 2272:2480/2595 of E9Q876
Sites not aligning to the query:
P55339 ABC-type transporter ATP-binding protein EcsA from Bacillus subtilis (strain 168) (see paper)
30% identity, 72% coverage: 3:223/308 of query aligns to 2:225/247 of P55339
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
28% identity, 69% coverage: 4:215/308 of query aligns to 2:219/240 of 6mjpA
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
30% identity, 73% coverage: 5:228/308 of query aligns to 3:238/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
30% identity, 73% coverage: 5:228/308 of query aligns to 3:238/238 of 6s8gA
6mbnA Lptb e163q in complex with atp (see paper)
29% identity, 74% coverage: 2:230/308 of query aligns to 1:241/241 of 6mbnA
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
30% identity, 69% coverage: 5:215/308 of query aligns to 3:219/233 of 6b8bA
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
30% identity, 69% coverage: 5:215/308 of query aligns to 3:219/235 of 6mhzA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
30% identity, 69% coverage: 5:215/308 of query aligns to 3:219/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
30% identity, 69% coverage: 5:215/308 of query aligns to 3:219/234 of 4p31A
8f5bA Human abca4 structure in complex with amp-pnp
30% identity, 72% coverage: 19:240/308 of query aligns to 737:960/1924 of 8f5bA
Sites not aligning to the query:
7e7oA Cryo-em structure of human abca4 in nrpe-bound state (see paper)
30% identity, 72% coverage: 19:240/308 of query aligns to 824:1047/2003 of 7e7oA
Sites not aligning to the query:
P78363 Retinal-specific phospholipid-transporting ATPase ABCA4; ATP-binding cassette sub-family A member 4; RIM ABC transporter; RIM proteinv; RmP; Retinal-specific ATP-binding cassette transporter; Stargardt disease protein; EC 7.6.2.1 from Homo sapiens (Human) (see 43 papers)
31% identity, 68% coverage: 19:228/308 of query aligns to 945:1156/2273 of P78363