SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_057508604.1 NCBI__GCF_001431535.1:WP_057508604.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

2df8A Crystal structure of the ph0510 protein from pyrococcus horikoshii ot3 in complex with beta-d-fructopyranose-1-phosphate
27% identity, 79% coverage: 61:366/386 of query aligns to 33:316/325 of 2df8A

query
sites
2df8A
R
 
R
V
 
I
I
 
L
L
 
Y
T
 
L
G
 
G
A
 
C
G
 
G
T
 
S
S
|
S
A
 
H
Y
 
F
I
 
L
G
 
S
Q
 
K
C
 
L
L
 
L
A
 
A
P
 
M
L
 
V
L
 
T
D
 
N
R
 
M
Q
 
H
L
 
G
A
 
G
A
 
L
R
 
G
V
 
I
D
 
-
A
 
A
V
 
L
P
 
P
T
 
C
T
 
S
D
 
E
I
 
F
V
 
L
C
 
Y
A
 
S
P
 
K
Q
 
E
L
 
T
Y
 
Y
L
 
-
D
 
P
P
 
I
G
 
G
Q
 
E
P
 
V
L
 
E
L
 
L
L
 
A
V
 
V
S
 
G
F
 
I
G
x
S
R
|
R
S
|
S
G
 
G
N
 
E
S
x
T
P
 
T
E
 
E
S
 
I
L
 
L
A
 
L
A
 
A
V
 
L
E
 
E
L
 
K
A
 
I
E
 
-
A
 
-
L
 
-
V
 
-
G
 
-
D
 
N
I
 
V
R
 
K
H
 
K
L
 
L
V
 
G
V
 
I
T
 
T
C
 
T
N
 
R
P
 
E
A
 
S
G
 
-
A
 
S
L
 
L
A
 
T
R
 
R
I
 
M
P
 
C
V
 
-
A
 
-
Q
 
-
A
 
D
M
 
Y
T
 
S
L
 
L
L
 
V
L
 
V
P
 
P
E
 
-
Q
 
-
T
 
A
H
 
I
D
 
E
T
 
E
S
 
S
F
x
V
A
 
V
M
 
M
T
 
T
S
 
H
S
 
S
F
 
F
S
 
T
C
 
S
M
 
F
M
 
Y
Y
 
F
A
 
A
T
 
Y
L
 
L
A
 
Q
A
 
L
L
 
L
S
 
R
P
 
Y
A
 
S
A
 
Y
A
 
G
L
 
L
D
 
P
-
 
P
A
 
L
R
 
N
I
 
A
A
 
G
P
 
E
I
 
I
A
 
S
R
 
K
A
 
A
T
 
T
E
 
E
A
 
K
V
 
S
I
 
L
D
 
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G
 
Y
A
 
E
L
 
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Y
L
 
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L
 
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T
 
I
L
 
V
A
 
E
A
 
S
A
 
F
R
 
D
N
 
F
D
 
Q
R
 
N
V
 
I
V
 
I
Y
 
F
L
 
L
G
 
G
S
 
S
G
 
G
L
 
L
L
 
L
Q
 
Y
G
 
P
L
 
V
A
 
A
R
 
L
E
|
E
A
 
A
S
 
S
L
 
L
K
|
K
L
 
M
G
 
K
E
|
E
L
 
M
T
 
-
N
 
-
G
 
-
A
 
-
V
 
-
V
 
-
T
 
S
C
 
I
F
 
F
D
 
W
S
 
S
P
 
E
-
 
A
-
 
Y
-
 
P
-
 
T
L
 
F
G
 
E
F
 
V
R
 
R
H
|
H
G
 
G
P
 
F
K
 
K
T
 
A
F
 
I
V
 
A
T
 
D
D
 
E
D
 
K
T
 
T
L
 
L
V
 
V
I
 
V
V
 
L
F
 
M
V
 
V
S
 
-
N
 
E
D
 
E
P
 
P
Y
 
F
T
 
-
R
 
-
R
 
E
Y
 
W
D
 
H
H
 
E
D
 
K
L
 
L
I
 
V
D
 
K
E
 
E
L
 
F
R
 
K
R
 
N
D
 
Q
G
 
G
C
 
-
A
 
-
A
 
A
R
 
K
V
 
V
V
 
L
E
 
V
I
 
I
S
 
S
A
 
N
Q
 
S
P
 
P
R
 
Q
A
 
D
G
 
L
A
 
G
L
 
Q
D
 
D
D
 
Y
T
 
S
L
 
I
A
 
E
V
 
L
P
 
P
G
 
R
L
 
L
E
 
-
R
 
-
A
 
S
E
 
K
D
 
D
V
 
A
D
 
N
L
 
P
L
 
I
W
 
-
P
 
P
Y
 
Y
V
 
L
A
 
P
A
 
I
A
 
V
Q
 
Q
I
 
L
Y
 
L
A
 
S
L
 
Y
L
 
Y
H
 
K
S
 
A
L
 
V
E
 
S
R
 
R
G
 
G
V
 
L
T
 
N
P
 
P
D
 
D
N
 
N
P
 
P

Sites not aligning to the query:

Query Sequence

>WP_057508604.1 NCBI__GCF_001431535.1:WP_057508604.1
MTSPDVLGFPEPLLEAKGALWTAREIAQQPAMLQATHALVASLAEQLRAFVAPLVDDPGA
RVILTGAGTSAYIGQCLAPLLDRQLAARVDAVPTTDIVCAPQLYLDPGQPLLLVSFGRSG
NSPESLAAVELAEALVGDIRHLVVTCNPAGALARIPVAQAMTLLLPEQTHDTSFAMTSSF
SCMMYATLAALSPAAALDARIAPIARATEAVIDGALPLLRTLAAARNDRVVYLGSGLLQG
LAREASLKLGELTNGAVVTCFDSPLGFRHGPKTFVTDDTLVIVFVSNDPYTRRYDHDLID
ELRRDGCAARVVEISAQPRAGALDDTLAVPGLERAEDVDLLWPYVAAAQIYALLHSLERG
VTPDNPNPAGIVNRVVQGVQLYALDA

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory