Comparing WP_057509062.1 NCBI__GCF_001431535.1:WP_057509062.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
P0AFF4 Nucleoside permease NupG; Nucleoside-transport system protein NupG from Escherichia coli (strain K12) (see paper)
32% identity, 97% coverage: 7:397/405 of query aligns to 6:407/418 of P0AFF4
>WP_057509062.1 NCBI__GCF_001431535.1:WP_057509062.1
MTYAMSRLGAMMFLQFFIWGAWFVTLGTYLVQGPLQASASQVATAFLSQSIGAIVAPFLV
GLVADRYFAAQRILAVLHLAGAVLMWMASTASDFGTFSACVMGYMLLFMPTLALANSVAM
RHMQSPEKQFPLVRVAGSVGWIVAGVLIGWLGWEQAHRLELTFQMAAIASLALGLYAFTL
PHTPPLARQRDAGMGQILGLDSLRLLKSRSYLVFFLASIAICIPLAFYYNFTNPYLNDLG
VRGAAGLQSLGQVSEVLLMLAMPFLFVRLGVKTMLAVGMAAWVVRYVMFAFGDAGGGFSL
LVIGIVLHGICYDFFFVTGQIYTDAHAGPAARSSAQGFITLATYGVGMLIGTFLSGAVVE
HYTTAAGPDWQKIWLFPAGVALVVLIAFLLLFRDRPVIAAAPSTP
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory